| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2302 |
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| Symbol | |
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| ID | 4922295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2697457 |
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| End bp | 2698971 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163887 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001094427 |
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| Protein GI | 127513230 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGTA TCGTCGGAAT AGTTGGCCGA ACATCGGTTA ATCAGACAAT CTATGATGCA
CTCACAGTGC TACAGCATCG TGGCCAAGAC GCCGCGGGCA TTGTCACCGT TGATGGCAAT
GCGTTTAGAT TGCGTAAGGC CAATGGTCTG GTAAAAGACG TATTTGAACC TAAGCATATG
CAGCGCCTGC AGGGCACCGC CGGCATAGGT CACGTGCGTT ACCCAACTGC GGGTAGCTCG
AGCGCGTCTG AGGCGCAACC TTTCTATGTT AACTCTCCTT TCGGGATCTC TCTGGCGCAC
AACGGCAACC TGACCAACAC GGTCGAGCTG CACGAGCGTC TGGTGAAGCA ACGTCGTCAC
GTTAACACCA CCTCAGATTC TGAAGTCCTG CTTAACCTGT TGGCCGACGA GCTGCAACAC
ACCAAGAGCC AGTACCTCAC TGCCGACGAG GTGTTTGAGG CGGTCACTAA GGTACACGAG
CTGACACGCG GCGCCTACGC CGTGGCGGCG ATGATCATCG GCCAGGGTCT GGTGGCGTTT
CGTGACCCTT ACGGTATTCG TCCACTGGTA CTGGGTAAGA ACGAGACAGA GCAGGGCACC
GAATATATGG TGGCCTCTGA GAGCGTGGCC CTTGATGCCG TAGGCTTCGA GACGGTACGT
GATGTCGCTC CAGGCGAAGC CATCTATATC TCGTTAGATG GTCAGCTCTA TACCCGTCAG
TGTGCCCAGT CGCCAAGCTA TTCACCTTGT ATCTTCGAAT ACGTTTACTT CGCCCGCCCA
GACTCGACCA TCGACAAGGT GTCTGTCTAC GGCAGCCGCG TCAACATGGG TACCATGTTG
GGTGAGAAGA TTAAGAAAGA GTGGGAAGAT CACGATATCG ACGTTGTGAT CCCAATCCCT
GAAACCTCAT GCGATATCGC CCTAGAGATC GCCCGTAACC TGGACCTGCC ATACCGTCAG
GGCTTCGTGA AGAACCGTTA CATCGGCCGT ACCTTCATCA TGCCGGGTCA GCAGGAGCGT
AAGAAGTCGG TTCGCCGCAA GCTAAATGCC ATCAACGCCG AGTTTAAGGG CAAGAACGTG
CTGCTGGTGG ATGACTCTAT CGTGCGCGGT ACTACCTCAG AGCAGATCAT CGAGATGGCC
CGTGAAGCCG GTGCCAAGAA GGTTTACTTC GCCTCGGCGG CCCCTGAGAT CCGTTTCCCT
AACGTCTATG GTATCGACAT GCCAACCTCG AGCGAGTTGA TCGCCCACGG TCGCGACGCG
GAAGAGATCA ACAAGCTGAT TGGTGCCGAT GGCATCATCT TCCAGGACCT GCAAGATCTT
ATTGAAGCCG TACGTCAGCA AAACCCAGAT ATCAAACGTT TCGAGACCTC GGTATTCGAC
GGTAACTATA TTACCAACGA CGTGGATCAG GCCTATCTGG ATCACCTGAC CCAGCTGCGT
AACGACGATG CCAAGGCCAA TCGCATCAAG GATATCGGCA CTAACTTAGA GCTACATAAC
GTCTGTCATC CCTAA
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| Protein sequence | MCGIVGIVGR TSVNQTIYDA LTVLQHRGQD AAGIVTVDGN AFRLRKANGL VKDVFEPKHM
QRLQGTAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL HERLVKQRRH
VNTTSDSEVL LNLLADELQH TKSQYLTADE VFEAVTKVHE LTRGAYAVAA MIIGQGLVAF
RDPYGIRPLV LGKNETEQGT EYMVASESVA LDAVGFETVR DVAPGEAIYI SLDGQLYTRQ
CAQSPSYSPC IFEYVYFARP DSTIDKVSVY GSRVNMGTML GEKIKKEWED HDIDVVIPIP
ETSCDIALEI ARNLDLPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA INAEFKGKNV
LLVDDSIVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTS SELIAHGRDA
EEINKLIGAD GIIFQDLQDL IEAVRQQNPD IKRFETSVFD GNYITNDVDQ AYLDHLTQLR
NDDAKANRIK DIGTNLELHN VCHP
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