| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2297 |
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| Symbol | |
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| ID | 4922290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2688763 |
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| End bp | 2690337 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163882 |
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| Product | PEGA domain-containing protein |
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| Protein accession | YP_001094422 |
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| Protein GI | 127513225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAC ATTTAAGCAA TAAGCCAAAC AGGCAATTAA GCAATAAACC AAACAGGCAG
TTAAGCAAGC ACGGAGCATC CACCCTACTG AGCCTACTCT TCTTAGGTGT CATAGGGCTC
AGCCTGCCGG GCTGCGGCTC AGGTGGCGAT GACGGCAAAA CTAGCGAGCC AGCGGTTACA
CCACCGGTAG CCACACCGAC ACCAGAGGGG AGTCTCACAG TATCTGCTAG CGAGAGCGGC
GCTGCCATCT ACCTAGATGG GCGCTTCACT GGCAAGCTGA CCCCGGCCGA ACTCACCCTC
GAGCCCGGCG AATACACCAT AGGCGTGGGG CTCAACCAGA GTGAGCAGTA TCTTAGACGC
ACGGTTCAGG TAGAGGCCGA CCAGACCATT AGCCTGGCGC TGGATGAGAG CGATCGCCAG
ACGCCCAAGG CCTGGAAGGC GCTGTTTATC GGTGTGGCCA AGGTGCAGGC TCAGGGTGAT
AGTTGTGTCA GCCAATACCA GACCGAGCAG CTCGACGCTG GCTTTGACTT CTTTCGCTGG
AGCTTTAAGG AGCGCGTCGA GCCCTACAGC TATCACACCA TGGATTGGCA GTTTGAGCGT
CTGGATATCA CGGATGAGGT GGTGACCCTC AGCAATGACA AGCTCATCGG CCCGGCGGAG
ATCGAGCCCT ATCTGACGAA CGTCGACAAG GGCGACTATG ACCTCATCGT CAGTTTCTTT
CGCGGCGGCG CCGGCAGCGA TGACTGCTAC ATAGACGACT TCAAGGGCAT CGCCTGGTAT
GACTATCGCG TGCTCAACTC AGACGCCTCC TACTACACGA TACGCTTCTA TGATGATGTT
AGCGGGCGTA TCGAGGCGGC CAAGGCAAAT GACAGAGATC CGGGCATGTA CATCCACGAG
TGGCTGCACA CCACGGCGGA GTGGTTCTTT CCCGATCAGG GCTATGCCCA GCCCAGCAGC
GACGGCCAGG TGGTCCACGC CGCCGAGGTA TACGGCTACA GCTGGCCCTG GATGAGTTGG
TATCGAGACC TCATCCGCGG CCAGGTGAAA CAGCAAGCCA GCTATGTGGG CATAGGCCCG
GACGCCCTGC TCGGCTGTAG CGTCAGCGAA GACGCCTTAG GCCTGTGTTC GAGCGCCGCA
GGTCAAGCAG CATCAGACGC CTCTAGTCAG GTGGCGCCAG AGGCCTTTAT TCAAACACCC
TTGATCTATG ACAAGAGCGC CGGACAACAG GTGCCCTGGC AGACGGTGAG CCGACCCTAT
CGAGATGGCC GGGTCTCATT TGGTCAGATC CCGTCCGGTG AGCAGCTCTG CCTCAATCGC
CACACCGTCA GCTACCTGCT CGGCGATGGC ACCCTAGCAC TCACCTTAGA TGAAAGCCTC
TGCGGCGAGC CGTCCAGCGC CCGTCTCAGC TTTACGCCTT GGCTAGCAGA GGAGCAGTCG
TCGCGTGTAA TCACGCTGCC CATTGACCAA GCCAGCAGGC TTTTAGCCAG CAAAAAACCC
TTTATTGAAG GTGAGCACCT CAGCTTAGAT GAGATCTTAA TTGAGCTAAG AGCACTGATG
GCGCACTCGC TCTAG
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| Protein sequence | MERHLSNKPN RQLSNKPNRQ LSKHGASTLL SLLFLGVIGL SLPGCGSGGD DGKTSEPAVT
PPVATPTPEG SLTVSASESG AAIYLDGRFT GKLTPAELTL EPGEYTIGVG LNQSEQYLRR
TVQVEADQTI SLALDESDRQ TPKAWKALFI GVAKVQAQGD SCVSQYQTEQ LDAGFDFFRW
SFKERVEPYS YHTMDWQFER LDITDEVVTL SNDKLIGPAE IEPYLTNVDK GDYDLIVSFF
RGGAGSDDCY IDDFKGIAWY DYRVLNSDAS YYTIRFYDDV SGRIEAAKAN DRDPGMYIHE
WLHTTAEWFF PDQGYAQPSS DGQVVHAAEV YGYSWPWMSW YRDLIRGQVK QQASYVGIGP
DALLGCSVSE DALGLCSSAA GQAASDASSQ VAPEAFIQTP LIYDKSAGQQ VPWQTVSRPY
RDGRVSFGQI PSGEQLCLNR HTVSYLLGDG TLALTLDESL CGEPSSARLS FTPWLAEEQS
SRVITLPIDQ ASRLLASKKP FIEGEHLSLD EILIELRALM AHSL
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