| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2291 |
|---|
| Symbol | |
|---|
| ID | 4922313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2678579 |
|---|
| End bp | 2679115 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640163876 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094416 |
|---|
| Protein GI | 127513219 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAG AGCTAATACC ACAACTTATG CCACAAGAAC CGACAGGCCA GGCTCACATT
GACCTTAAGC CACAGGTAAG CACGCCACTA AATCTGATGC TTGGGCTGCT GGGCGGAGTG
GCCCTGGCAG TAATGATCGC CCTAAACAGC GAGCTGGCCA AGTATGGCTC GCCGCTGCTG
GCCTCTTGGG TCGCCCATGG GGTCGGCACT CTAGTAGCCC TCCTACTGCT GGGCGCGGTG
CGCCTGAGAC AAGGTGCGCT TACAAGGCGC AACGAGGCGG CGCCCTGGTG GGCCTATCTA
GGAGGCTTGC CCGGCGCCTT CACCGTGGTG CTGGGAGCCA TGACGGTCAA CAGCGCATTG
GGGCTGAGCG CCAGCATCGC CTTCATCATG GCGGGGCAGA TCCTCTTCGG CCTGGTGTGC
GATAGCCTGG GCTTGTTTGG CATGGCGAGG CGCCGCCTGA GTAGGGGGCA GGGTGCTGCT
CTGACCGTGA TGACCCTTGG CGCCCTGATT GTCTTGCTGG CTCAGGAGGG CGCGTGA
|
|---|
| Protein sequence | MTKELIPQLM PQEPTGQAHI DLKPQVSTPL NLMLGLLGGV ALAVMIALNS ELAKYGSPLL
ASWVAHGVGT LVALLLLGAV RLRQGALTRR NEAAPWWAYL GGLPGAFTVV LGAMTVNSAL
GLSASIAFIM AGQILFGLVC DSLGLFGMAR RRLSRGQGAA LTVMTLGALI VLLAQEGA
|
|---|
| |