Gene Shew_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2288 
Symbol 
ID4922310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand- 
Start bp2673231 
End bp2674322 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content59% 
IMG OID640163873 
Productgalactose-1-phosphate uridylyltransferase 
Protein accessionYP_001094413 
Protein GI127513216 
COG category[C] Energy production and conversion 
COG ID[COG1085] Galactose-1-phosphate uridylyltransferase 
TIGRFAM ID[TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAAA AGACCCAGGC TAAGTCGCAG TTTTCAACCG ATGAACACCC CCATCGCCGT 
TTCAATCCCC TCACCGGCGA GTGGGTGTTG CTGTCACCAC ATAGAAGTAA GCGGCCCTGG 
CAGGGACAGA CCGAGGCGCT GGATCTGACC ACGGCGCCCA GCTACGACAG CGAGTGCTTC 
CTCTGCCCTG GCAATAAACG CATCAATGGC GAGCAAAACC CCAAGTACGA CACCACCTTC 
GTGTTTCAAA ACGACTTCGC GGCCCTCAAT AGTGACGGTC CCAAAGCTCA GGGGGAGGAC 
CCGCTGTTTC GCTTCGAGAC GGTAGAGGGG GAGAGTCGCG TGCTCTGCTT CTCACCGGAT 
CACAGCCTGA CGCTAGCGCA GCTCGACCCC GAGGCGATGC AGGCGGTGAT CGCCGCCTGG 
CAGAGCCAGA GCGAGCTATT GGGGAAGAAG TATCTCTGGG TGCAGGTATT TGAAAACAAG 
GGCGCCGCCA TGGGCTGCTC TAACCCCCAT CCCCATGGGC AGATCTGGGC CCATAACCAC 
CTTCCCACCT TGGTGGCGAC GAAACAGCAG CGCCTTGCGG ATTACTACCA GCAGCATCAC 
AGCAACCTCC TGGGCGACTA TGTCGAGCGC GAGCTACAGC AAGAAGTGCG CATTGTGGTA 
AGCAACCATG ATTGGGTGGC GCTTGTGCCT TACTGGGCCA GCTGGCCCTT CGAGACCCTC 
GTGCTGCCAA GATTTGATAT TAGGCGCATG ACCGAGCTGA CCGCCGAAAC CCGTGAAAGC 
CTGGGGGAGA TCATAGGGGC GCTCACCGTG CGTTACGACA ACCTGTTCCA GTGCGCCTTT 
CCCTATTCCA TGGGTTGGCA CGGCGCGCCG TTTGATGGCC AGGATCACCC CGAGTGGTGC 
CTGCACGCTC ATTTTTATCC GCCGCTGCTG CGTAGCGCCA GCGTGAAAAA ATTCATGGTG 
GGGTACGAGC TGCTGGCCGA GATCCAGCGG GACATCACCC CAGAGCAGGC CGCCGCACGT 
CTGAGGGAAC AATCCCCAAT CCACTACAAG AGTAGCCATT ACAAGAACAG CCACAACAAG 
CAGAGCCAAT AA
 
Protein sequence
MFQKTQAKSQ FSTDEHPHRR FNPLTGEWVL LSPHRSKRPW QGQTEALDLT TAPSYDSECF 
LCPGNKRING EQNPKYDTTF VFQNDFAALN SDGPKAQGED PLFRFETVEG ESRVLCFSPD 
HSLTLAQLDP EAMQAVIAAW QSQSELLGKK YLWVQVFENK GAAMGCSNPH PHGQIWAHNH 
LPTLVATKQQ RLADYYQQHH SNLLGDYVER ELQQEVRIVV SNHDWVALVP YWASWPFETL 
VLPRFDIRRM TELTAETRES LGEIIGALTV RYDNLFQCAF PYSMGWHGAP FDGQDHPEWC 
LHAHFYPPLL RSASVKKFMV GYELLAEIQR DITPEQAAAR LREQSPIHYK SSHYKNSHNK 
QSQ