| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2286 |
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| Symbol | |
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| ID | 4922308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2670362 |
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| End bp | 2671921 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163871 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001094411 |
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| Protein GI | 127513214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAGA CACTGGATAT TGGCATTTTG CTGGTCTACG CCCTTGGGCT GCTGGGGCTG
GCGCTGTGGA TCTCCCGCCA GGACAAACGT CATGAGCGAG ACACAAAGGA CTACTTTCTG
GCAGGCAAGG CCTTGCCCTG GTGGGCGATC GGCGCCTCAC TCATCGCCTC TAACATCTCC
GCCGAGCAGA TCATCGGCAT GTCGGGCTCT GGTTATGCCA TCGGTCTGGC CATCGCCTCC
TACGAGTGGA TGGCGGCGAT CACCTTGATC TTGGTGGGCA AGTATATGCT GCCCATCTTC
ATCAAGAACG AGATCTACAC CATGCCCCAG TACCTGGAGC AGCGCTTCGA CAAGCGGGTG
AAGACCACAC TGGCGCTGTT CTGGTTATCT GTCTACATCT TGGTCAACCT CACCGCCGTG
CTCTGGCTCG GCGGCCTGGC GATCGAGACG GTGGCGGGGA TCGACTGGCT CTATGGCATG
GTGTTCCTGG CGCTGTTTTC CCTGGCCTAC TCCCTCTATG GTGGCCTCAA GGCGGTGGCC
TACACGGATA TCATTCAGGT AGTGCTGCTG ATCTTCGGTG GCTTGCTGCT CAGCTATCTG
GCGCTGGATA GGGTCGCCGA CGGGCAGGGC GTCTTGGCCG GATTCGACAG GCTTTCCAGC
GCCTTGCCGG AACATTTCGA GATGATCCTG AGTCAGAGTA ACCCCCACTA CATGAGCCTG
CCGGGGATCT CTGTGCTGGT GGGCGGCTTG TGGATCATGA ACATCAGCTA CTGGGGCTTT
AATCAATACA TCATACAGCG CGCCCTGGCG GCCAAGAGCG TGGCCGAGGC GCAGAAAGGG
ATCGCCTTCG CCGCCTATCT TAAGCTCTTG ATGCCGCTCA TCGTGGTGCT GCCGGGGATC
GCCGCCGTGC TCCTCTATCC CGGGCTGGAG TCGCCGGATC AGGCCTATCC TTCCATGATG
GCCCTGATGC CCGCCGGGGT GAAGGGGCTG GTGTTTGCCG CGCTAGTGGC GGCCATCGTT
TCCTCCCTGG CCTCCATGAC CAACAGCATC TCGACCATAT TCACCATGGA TATCTATGCC
ATGCTGCGCC CGGCCAAATC CGAGGGGCAC TATGTGTTGG TGGGCAGGCT TTCTAGCCTG
ATAAGCCTGT TGATCGCCCT GGTGATGGCC CAGCCGCTGC TGGGTGAGTT CGAGCAGGCC
TTTCAATATA TTCAGGAGTT TACCGGGGTC TTCACCCCAG GGATCGTGGT GATCTTCCTA
ACGGGCATGT TCTGGCGCAG GGCGACCTCT CAAGGCGCGC TGGCGGCGGC GCTGGGCTCG
GCCATCTTCT CCTTCGGCCT GAGGTTCTAC TGGCCCGAGC TGCCCTTCAT GGATCGCATC
GGCCTGGTGT TCCTGCTCTG TCTGGCTCTT AGCGTGCTGG TTTCCCTCAT GGGGCGCTCG
CTCGAAGAGG GGGCGAGTGT GGCGCTAGGC GGCGTCAGCT TCAAGACGGG CAGAGCTTTC
AACGTCAGCG CCCTCGGGGT GGTGGTGATC CTCAACTTTC TCTATGTCAC CTGGTGGTAA
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| Protein sequence | MLETLDIGIL LVYALGLLGL ALWISRQDKR HERDTKDYFL AGKALPWWAI GASLIASNIS
AEQIIGMSGS GYAIGLAIAS YEWMAAITLI LVGKYMLPIF IKNEIYTMPQ YLEQRFDKRV
KTTLALFWLS VYILVNLTAV LWLGGLAIET VAGIDWLYGM VFLALFSLAY SLYGGLKAVA
YTDIIQVVLL IFGGLLLSYL ALDRVADGQG VLAGFDRLSS ALPEHFEMIL SQSNPHYMSL
PGISVLVGGL WIMNISYWGF NQYIIQRALA AKSVAEAQKG IAFAAYLKLL MPLIVVLPGI
AAVLLYPGLE SPDQAYPSMM ALMPAGVKGL VFAALVAAIV SSLASMTNSI STIFTMDIYA
MLRPAKSEGH YVLVGRLSSL ISLLIALVMA QPLLGEFEQA FQYIQEFTGV FTPGIVVIFL
TGMFWRRATS QGALAAALGS AIFSFGLRFY WPELPFMDRI GLVFLLCLAL SVLVSLMGRS
LEEGASVALG GVSFKTGRAF NVSALGVVVI LNFLYVTWW
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