| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2285 |
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| Symbol | |
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| ID | 4922307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2669323 |
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| End bp | 2670378 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163870 |
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| Product | UDP-glucose 4-epimerase |
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| Protein accession | YP_001094410 |
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| Protein GI | 127513213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTG GTGGTAAGGA GGTGCCAGAG ATGAAAGGGG AGAAGATGAG CATCTTAGTC
ACGGGTGGCG CGGGCTATAT CGGCTCCCAT GCCTGCGTCG AGCTGCTGAG CGCCGGGCAT
CAGTTGGTGG TGCTGGATAA CCTGTCGCGG GCCAAATTCG AGTCCCTGGC GCGGGTCGAG
CAGATCACCG CGGCCAAACT TACCTTCGTC GAGGGGGATA TTCGCGATGA GCGGACGCTG
GATGCCCTGT TTTCCCATTA CCATATCGAT GCCGTGATGC ACTTTGCCGG GCTCAAGGCG
GTGGGGGAGT CGACCCGGCT GCCACTGGAA TACTACGACA ACAATGTGGT CGGCTCCATG
CGCCTGCTTA GCGCCATGAC TCGCCACGGG GTGAAGACCC TGGTCTTCTC CTCCTCGGCC
ACCGTCTATG GGGCCAATCC GCCGCTGCCC ATAATGGAAG CGGCACCCCG TTCCAGCACT
AACCCCTATG GCCAGACCAA GCTGGTGGTG GAGCAGATGT GCGCCGAGTG GGCTAACGCA
AAGCAAGATG TCAGCGTGAT CCTGCTGCGC TACTTTAATC CAGTCGGCGC CCACGAATCC
GGACTGATTG GCGAAGATCC CAAGGGGGAG CCCAATAATC TATTGCCCTA TATCACCCAG
GTCGCCATGG GGCATCGGCC CTATCTGTCT GTATTTGGTA GCGACTATGC CACAACCGAT
GGCACAGGCG TGCGCGACTA TATCCATGTG ATGGATCTGG TGCAGGGGCA CCTGGCGGCC
CTGACGCGCC TACATGGGGT GGCGGGCTGT CATACCTTTA ATCTGGGTTC GGGGCAGGGT
TATTCTGTGC TTGAGATGGT TAGGGCCTTC GAGCAGGCGA GCGGTAAAGA CATTGCGCTG
CATATGGCGC CGCGCCGCCC AGGGGATATC GCCGCCAGCT ATGCCTGCCC AGATAAGGCG
GCCCGGGAGC TCGACTGGCG GGTGGCGAGA GATCTTTCGC AGATGATGCA AGACAGCTGG
CGCTGGCAGT GTCGCAATCC CCGGGGATAT AGCTAA
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| Protein sequence | MSPGGKEVPE MKGEKMSILV TGGAGYIGSH ACVELLSAGH QLVVLDNLSR AKFESLARVE
QITAAKLTFV EGDIRDERTL DALFSHYHID AVMHFAGLKA VGESTRLPLE YYDNNVVGSM
RLLSAMTRHG VKTLVFSSSA TVYGANPPLP IMEAAPRSST NPYGQTKLVV EQMCAEWANA
KQDVSVILLR YFNPVGAHES GLIGEDPKGE PNNLLPYITQ VAMGHRPYLS VFGSDYATTD
GTGVRDYIHV MDLVQGHLAA LTRLHGVAGC HTFNLGSGQG YSVLEMVRAF EQASGKDIAL
HMAPRRPGDI AASYACPDKA ARELDWRVAR DLSQMMQDSW RWQCRNPRGY S
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