| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2277 |
|---|
| Symbol | |
|---|
| ID | 4922632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2660234 |
|---|
| End bp | 2660674 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640163862 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_001094402 |
|---|
| Protein GI | 127513205 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0786438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.928998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC AAACATTAAT CAAACTACTT AACAGCGATG CAGGACTGGC CCCCTTGGTA
CTGCGTCTAC CCCTAGGACT CATCTTCGCC GCCCACGGCG CCCAGAAGCT GTTCGGCTGG
TTTGGCGGCT ATGGCCTGGA AGGCACAGGG CAGTGGATGG CCAGCGTCGG CTTCGAACCC
GGTTACCTGA TGGCCCTGCT GGCCGGTAGC GCCGAGTTCT TCGGTGGTCT GGCACTGGTG
CTGGGTCTGC TGACTCGCCC CGCCGCGGCG CTGACCGCCT TCACCATGGC GGTGGCTATG
ACGCTGCATG TAGGCAACGG CCTGTTTGTC TCTAACAACG GCTACGAGTT TGCCTTGATA
TTGCTGGCGG CCTCGCTATC TCTGGCGGTG CAGGGCGGTG GACGCTACTC GGTCGACAAG
CTACTAACCG GTCGTCTCTA A
|
|---|
| Protein sequence | MNKQTLIKLL NSDAGLAPLV LRLPLGLIFA AHGAQKLFGW FGGYGLEGTG QWMASVGFEP
GYLMALLAGS AEFFGGLALV LGLLTRPAAA LTAFTMAVAM TLHVGNGLFV SNNGYEFALI
LLAASLSLAV QGGGRYSVDK LLTGRL
|
|---|
| |