| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2274 |
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| Symbol | |
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| ID | 4922629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2656418 |
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| End bp | 2658226 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640163859 |
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| Product | AAA ATPase |
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| Protein accession | YP_001094399 |
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| Protein GI | 127513202 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.363979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAGGGA AAATCTTGGA CAAATTAACA ATTAATGAAA TTGAGCTGCA TCGCTTCAAA
CGTTATAGAC AAAAAACTAT AAAGACACCT GATGGTTTTT GCCTACTTGC TGGTTCAAAT
AACTCCGGAA AATCTACATT CATGCAAGCT TTTGCTCTAT GGGAGTTTTG TAAGTCAGTT
ATCCAATTGG AACAAGGTGA CGACGCACTA ATCGATGAAA ATATAGGAAA AAAACAAGGT
GTAGGAGTAA ATGGAGAAGA TTTTCTTCCA ATAAGCATCC CCTCTTTAAA ACACCTTTGG
ACAAACCTCA GGGTTACAAG AGAAAAAGAC AATAAGGGAA GCAAAGAACC AGATGGATAT
ACACTTTGGA TAGAGGTTAA ATGGAAAAAT GAGACAATCA ATCAAGATCG TCATTTACGA
TTCTCCTTAT CACTAGCAAA TGAGCGTCTC TTTATTAAAA CCACAAAATC CAATGTAACA
GCCTCTGAAT CAATACCTAA AATTGCTTAT ATTCCGCCTT TTGCCGGGAT ACTAAACCGC
GAGCCATACC ATACAAAAGC GGTAAGAGCC AAATTAATTG GACAAGGATT GAGCGGTTCT
GTCATGAGAA ATACGCTCCT AGAACTCTAT CAAGTAAATC AAAAGGAAAG AGAAAGATTA
AAGGGTGATT TAGAAAGAAT ATCTAAGCTA GATCTATCAA ATCTCCGTAA AAATGATCGG
TGGGAGCATT TACTTGATGT CATGAGAGAA CTTTTCCAAG TTGAGCTTAT AGTTCACGAC
TTTAACGAAG ATTACCACAG CTCAATTAAA GCAGAATATT GGAAAGGTCG ATACAATGAA
AAACGAACGA AATTCATAAA ACACCCAGGA TTCAATCGGC GAGATATTAT GGTGGAAGGT
AGCGGATTAC TCCAACTTCT CAATGTTTTA TCTCTATCAC TTGATCCTTC ATACCAAATT
GTTTTTCTTG ATGAGCCTGA TGCTCACCTA CATCCAACTT TACAATTCGC ACTTTTAAAA
GAGTTGAATG TCTTAGCAGA AAAATATGAA AAACAAATTT TGTTTGCGAC TCATTCTACG
GAGCTTATTG CTTCTCAATC TCCTGATAAA ATTCTAAAGT TTGAAGCTAG CAAAGTAACG
CTGCTATCTG AAGAACATCA AAAAATTGGG CTCATCACTG GTCTTGGTTC TGAATTTTCT
CCTCAGCTTC ACCAACTACA ACGAAATAAA AAAGTAGTCT TTGTTGAAAA TGAGTCTGAC
TCGAACACAT TAAAGATGAT TGCGAGAACA TTAGGAACAC CTATTTCAAA TAATATTGTA
ATTTGGCCAT GGCCTGGCAA ACATGTTGAA CGACTGCAAT TATTTAATCA GCTAAAGCGT
GAAATTAGCG GTTTAAAAGG TTTAAGTATT CGAGACAGAG ATAATCAAGA CTACAATACT
ATTACGAATA CACTAATAGA CAAAAACAAT ACAGGTTGTG ATAAAGATGG TCTTCAGGCG
AGAACATGGA GATACCGTTA TATAGAAACC TACTTGTTAT GCCCCATTTC AATTGCAAGT
GCAGCAAATA TACCCACAGG AGAGGTAATT AGAGATGCTC GAGGTTTTGG TATAGACCTA
ACACCATTTT GCACACAAAA TATCATACCT GGATTAAAAG ATTTTACGTC AAAAGAGCTT
CTTACTGAAG GAGAAAATTG TCTTACCAAA CGGTACGGGA TTAATAAATA TGACGTAATT
AATAGAATGA AAAAAGAAAA TATTCATATC GATTTAGTAG AGTTAATCCA ACAAATTAAT
AGTTTATAA
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| Protein sequence | MIGKILDKLT INEIELHRFK RYRQKTIKTP DGFCLLAGSN NSGKSTFMQA FALWEFCKSV
IQLEQGDDAL IDENIGKKQG VGVNGEDFLP ISIPSLKHLW TNLRVTREKD NKGSKEPDGY
TLWIEVKWKN ETINQDRHLR FSLSLANERL FIKTTKSNVT ASESIPKIAY IPPFAGILNR
EPYHTKAVRA KLIGQGLSGS VMRNTLLELY QVNQKERERL KGDLERISKL DLSNLRKNDR
WEHLLDVMRE LFQVELIVHD FNEDYHSSIK AEYWKGRYNE KRTKFIKHPG FNRRDIMVEG
SGLLQLLNVL SLSLDPSYQI VFLDEPDAHL HPTLQFALLK ELNVLAEKYE KQILFATHST
ELIASQSPDK ILKFEASKVT LLSEEHQKIG LITGLGSEFS PQLHQLQRNK KVVFVENESD
SNTLKMIART LGTPISNNIV IWPWPGKHVE RLQLFNQLKR EISGLKGLSI RDRDNQDYNT
ITNTLIDKNN TGCDKDGLQA RTWRYRYIET YLLCPISIAS AANIPTGEVI RDARGFGIDL
TPFCTQNIIP GLKDFTSKEL LTEGENCLTK RYGINKYDVI NRMKKENIHI DLVELIQQIN
SL
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