| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2271 |
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| Symbol | |
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| ID | 4922626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2652156 |
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| End bp | 2653775 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640163856 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094396 |
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| Protein GI | 127513199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.846725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.34431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG ATGTCGCCAC ACCATTCCAA CAACTGCGAA TAAATAAATT CGCTGCCATT
CAAAATGGAC AGTTCGTCGC ATCGTTTAAA GTTCCGAGAA GTGCCGGCTT TACCCTGATC
ATTCCGAATG CGGACGATTT CTTAACCAAC AATATTTCGA TCATGACTCC CGATAATAAG
GTGTTAGATG CAAGCAACTT TGCTGCATTC GGGGTTGAGT TCAGTCAATT TTCACCTGAT
AATGAGCTCA CCGCCTTCTT GGCGACAGGC AACAGCTGGA TCATTAAATT CTCGGACGTC
ATTCCTGGCT CTTATACCGT CAGAGGGGTG ACCTCATCCG CAAAGTCGCA TCTTCCCATC
AGGGTCTTAG TTAAAAATTC GGATATTGCT CTCCATCTGG TAATAGGCTC TCCCTCCAAT
ATACCTATGG TAAATCATCA TCTTCCCATT TCAGTGTTAA TGGTTGACGG TGACCTTCCA
TACATTAATG GGAATGTATC CTTCGAAATT TTTAAGGATG GGGAAGCGCT GCAGCACGCC
AACATACGCG ATGACGGTGT ATATCCGGAT TATCAGGCAA ATGACGGCAC TTATTCGACG
CTTTTTATGC CGTTATCCGC TGGAGTTTAT GATGTGCTTA TCAATATTTC CGGCAGGAAT
AAGAATGGTG ACAAATTTGA GGCGCAGATA TTCAGATCTT TCAAGGTACT TCAGGATAAC
GTTTATCTTA CCGGCAAGCA TAGCGAAGTG CTTATCGATG AGGATGGCGA CGGCTACAAT
GATGCATTAA TGCTTGAGTT TGAAACCGGC GGAGTGTTTC AAGAAGAGGG AGTGTATTAT
ATCACGGTGA ACTTGGAGAC GAATGATGGA AGAACTTTGG TGGCTCATCA ACGCATAGAA
TCACCAGAGA AGAAATTTTA CGTTAAGTTT GATGGGAAGT ATCTCGGAAC TCTGGATTAT
TCAGGGGCAT TCAAGTTTTT TAGCATCGTA ATTGAATACA ATGACAGCAT TATTCATCTG
AATCAGTCTT TTGGCAGTAC CTCATACTAT GACCATGACT CTTGGGAACG TGACGACTTA
CTTTACTTAG GTAATGTGAC ATTCGAGCCC ATTTACAGCG CGGATGGGCG TTTCATCGAA
ATGATAGACG TCTCTTTTGA GGTGGATACG CTTCCAACGG CAGCAAGGTT TGGCTATTCG
GCCACAATAA CCACTGTCGG TAATGAGCAT GTCGGAGTCT ATGGCAATCC TGACATCGAA
CTGAAGAAAG GGATTAACAG AATTACATTC TCCATTCCTG CAGCTGATTT TGCAAAACTA
CAATCAAACA CGGCATTGAA AATAAGCCAA TTAACCATGT ATCCCTTGAT AAAGGGTGGC
AATGTTATAT CTAAAAGGAA TGTGGCAACC AGTGAATTAT ATTCCTGCTG GGACTTTCGA
GGCTGTTCAA CGGCCGAGAA TGCCATTCCC GTTGCGGTAG ACGATGAGGT CACTTCTACT
GGAAAAGCCA TGTATATACA TGTAGCCCAA AATGACTATG ACGGTGATTT GCTCAAGGTT
AGCGATCAAA AGAAAGATAA TTTTGGCACA TTAACACAGT GGAGCATTCA GTTTGATTAA
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| Protein sequence | MAADVATPFQ QLRINKFAAI QNGQFVASFK VPRSAGFTLI IPNADDFLTN NISIMTPDNK
VLDASNFAAF GVEFSQFSPD NELTAFLATG NSWIIKFSDV IPGSYTVRGV TSSAKSHLPI
RVLVKNSDIA LHLVIGSPSN IPMVNHHLPI SVLMVDGDLP YINGNVSFEI FKDGEALQHA
NIRDDGVYPD YQANDGTYST LFMPLSAGVY DVLINISGRN KNGDKFEAQI FRSFKVLQDN
VYLTGKHSEV LIDEDGDGYN DALMLEFETG GVFQEEGVYY ITVNLETNDG RTLVAHQRIE
SPEKKFYVKF DGKYLGTLDY SGAFKFFSIV IEYNDSIIHL NQSFGSTSYY DHDSWERDDL
LYLGNVTFEP IYSADGRFIE MIDVSFEVDT LPTAARFGYS ATITTVGNEH VGVYGNPDIE
LKKGINRITF SIPAADFAKL QSNTALKISQ LTMYPLIKGG NVISKRNVAT SELYSCWDFR
GCSTAENAIP VAVDDEVTST GKAMYIHVAQ NDYDGDLLKV SDQKKDNFGT LTQWSIQFD
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