| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2269 |
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| Symbol | |
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| ID | 4922624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2649007 |
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| End bp | 2649651 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163854 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001094394 |
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| Protein GI | 127513197 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.289735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATC AAATTGTGCC TGTGACGCCA TTTCAGCAAA ATTGCAGCAT CATCTGGTGT
GAAAAAACCA AACAGGCGGC CGTGGTCGAC CCGGGTGGCG ACATAGAGCG GATCCAGCAG
CAGCTGGCCC ATCATGGCCT GACCCTGGAG AAGATCTTGC TCACCCATGG GCATATCGAC
CATGTGGGTG GCGCTAAGGC GCTGGCCGAC GCGGCGGGTG TGCCCATCAT AGGCCCCCAT
AAGGACGATG CCTTCTGGCT GGAGACCCTG CCGCAACAGA GCAAGCACTT TGGGTTTCTG
CCCGTTGCCG CCTTCGAGCC GGCCCAGTAT CTTATTTCGG GCGATCGTGT CACAGTGGGC
GAGCAGACCT TGGAAGTCCT GCATTGCCCT GGGCATACGC CGGGCCATAT CGTGTTCTAC
AGTGAGGCCG ACAAGCTGGC CTGGGTGGGT GATGTGCTGT TTAAGGGCTC TATCGGCCGT
ACTGATTTCC CCCAGTCGAG TCATACGGAT CTGATAAATT CCATCACTCA GGTGCTCTGG
CCTTTGGGCC GTGAGGTTAG CTTTATTCCC GGCCATGGCC CCATCTCGAC CTTCGGCGCC
GAGCGGCAGC AAAACCCCTT CGTAGCGGAT CAACTGCTGA ACTGA
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| Protein sequence | MKYQIVPVTP FQQNCSIIWC EKTKQAAVVD PGGDIERIQQ QLAHHGLTLE KILLTHGHID
HVGGAKALAD AAGVPIIGPH KDDAFWLETL PQQSKHFGFL PVAAFEPAQY LISGDRVTVG
EQTLEVLHCP GHTPGHIVFY SEADKLAWVG DVLFKGSIGR TDFPQSSHTD LINSITQVLW
PLGREVSFIP GHGPISTFGA ERQQNPFVAD QLLN
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