| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2253 |
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| Symbol | trpD |
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| ID | 4922806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2632314 |
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| End bp | 2633363 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163838 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001094378 |
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| Protein GI | 127513181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00439648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAAC TACAGCCGAT TTTCGACAGG CTTTATCAGG GGCAAACCAT CAGCCGCGAG
GAGACCAAGG CGCTGTTTAG CGAGATAGTC GAGGGCAAGA TGGATCCCGT CGCCATGGCC
GGTATGTTGG TCGCGATGAA GATGCGCGGC GAGACCATAG ATGAGATCTC CGGCGCCGCC
GACGCCCTGC TGCAAGCCGC CAAGGCGTTT CCCGCCCCCA GTGAGGCGAC ACGCACCCAG
GGCATAGTGG ATATTGTTGG CACAGGTGGA GACGGTCACA ACACCATCAA CATCTCGACC
ACCTCAGCCT TCGTGGCCGC CGCGGCGGGC GCTAAGGTGG CCAAGCACGG CAATCGCAGC
GTATCGAGCA AGTCTGGCTC GTCTGATCTG CTGGCGCAGT TTGGTATCGA TCTCACCATG
GCGCCCGAGA CCGCAAGAGA CTGTCTCGAC GACTTGGGGC TCTGTTTCCT GTTCGCGCCC
CACTATCACG GCGGCGTGCG CCACGCAGTG CCGGTACGTC AGGCGCTGAA GACCCGCACC
CTGTTTAACG TCTTAGGTCC ATTGATCAAT CCGGCCAGAC CCGACTACAT GCTACTGGGG
GTCTATGATC CTATGCTGGT GCGCCCTATC TGTGACGTGC TTAAGGCGCT GGATGTCAAA
CGCGCCATGG TGGTTCACGG CAGCGGCCTG GATGAGGTAG CGGTACACGG CGAGACCTTA
GTCTGTGAGC TGAAACAGGG TGAAATCGTC GAATATTACC TCTCACCCGA GGCCCTGGGG
CTCAGCCGCG CCGCGATAAG CGATCTCGCC GGTGCAGGCC CTGCAGAAAA CGCCGAAATC
ACCCGCGCCA TATTGCAAGG CCATGGCGAG TTGGCGCACA CTGAGGCGGT AGCTGCCAAT
GCGGGCTGCG CCCTCTATGT ATCCGGCTGC TGTGACAGTC CACAGCAAGG CACGGCGCTG
GCGCTACAGA CCCTCGCCAG CGGCAAGGCA TACATCCTAC TCCAGCAGCT TGCTAGCGCG
AGCCAAAGTG ACAACCTAGG AACAAACTGA
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| Protein sequence | MSELQPIFDR LYQGQTISRE ETKALFSEIV EGKMDPVAMA GMLVAMKMRG ETIDEISGAA
DALLQAAKAF PAPSEATRTQ GIVDIVGTGG DGHNTINIST TSAFVAAAAG AKVAKHGNRS
VSSKSGSSDL LAQFGIDLTM APETARDCLD DLGLCFLFAP HYHGGVRHAV PVRQALKTRT
LFNVLGPLIN PARPDYMLLG VYDPMLVRPI CDVLKALDVK RAMVVHGSGL DEVAVHGETL
VCELKQGEIV EYYLSPEALG LSRAAISDLA GAGPAENAEI TRAILQGHGE LAHTEAVAAN
AGCALYVSGC CDSPQQGTAL ALQTLASGKA YILLQQLASA SQSDNLGTN
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