Gene Shew_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2250 
Symbol 
ID4922803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2628845 
End bp2629705 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content55% 
IMG OID640163835 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001094375 
Protein GI127513178 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00409955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGATG AAACGCGTTT AATCGATCTT CACAGCCACA CCACGGCATC CGACGGCCAG 
TTAACCCCGT CAGAATTAGT GGCCCGTGCC CTGGATAATG GGGTGCAGAT GCTGGCCATT
ACCGATCACG ATACCTTAGC CGGTCTTAAG GAAGCCCACA GCTTCAACGA CAGTCAAGCA
GAGCCTCTAA CTCTGATTAA CGGCTGCGAG ATCTCTACCC GCTGGAATAA CTTCGATATT
CATATCGTCG CCTTGAATAT TGACCCTGAA CATCAGGGGC TGGATACCTT CCTGACCCAG
CAGAGGGCCT TGCGTGAGGC GCGGGCGATG GAGATAGGCG TGCGCCTGGA GAAGGCGGGC
ATCAGCGGCG CCTATGAAGG GGCTAAGGCG TTAGCCGAAG GTGCTGCGCT GAGTCGTGGC
CATTATGCAC GCTGGCTGGC GGACAACGGC TATGCTACCA ATGCTGCCGC CGTGTTCAAG
AAATACCTGG CCCGGGGCAA GACAGGCTAT GTGCCAAACA ATTGGTCTGA CATGGAAACC
GCTATCGCCA TCATTCATGA GGCGGGCGGC GTCGCCGTGC TGGCACATCC TAGCGGCTAC
AAGTTGTCGG CCAAATGGTT AAAGCGTTTG GTGCGTGAAT TTAAGGCCGC CGGTGGCGAT
GCCATGGAAG TGGTGCTGGG GCAGCAGACC CTGGACGATC GTAACAACTT AATAGCCTTG
AGTCGGCTAA ATGAACTGCA TGCCTCGCTG GGAAGCGATT TTCATTTTCC CGGTAGCTGG
CTCGAGTTAG GTAGAAATAT GTTCCAACCC CAAGGTGTCG ATTGGGTGTG GCAAATGGAT
AATTGGATGG GAAACCCATG A
 
Protein sequence
MTDETRLIDL HSHTTASDGQ LTPSELVARA LDNGVQMLAI TDHDTLAGLK EAHSFNDSQA 
EPLTLINGCE ISTRWNNFDI HIVALNIDPE HQGLDTFLTQ QRALREARAM EIGVRLEKAG
ISGAYEGAKA LAEGAALSRG HYARWLADNG YATNAAAVFK KYLARGKTGY VPNNWSDMET
AIAIIHEAGG VAVLAHPSGY KLSAKWLKRL VREFKAAGGD AMEVVLGQQT LDDRNNLIAL
SRLNELHASL GSDFHFPGSW LELGRNMFQP QGVDWVWQMD NWMGNP