Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2250 |
Symbol | |
ID | 4922803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2628845 |
End bp | 2629705 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163835 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001094375 |
Protein GI | 127513178 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00409955 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGATG AAACGCGTTT AATCGATCTT CACAGCCACA CCACGGCATC CGACGGCCAG TTAACCCCGT CAGAATTAGT GGCCCGTGCC CTGGATAATG GGGTGCAGAT GCTGGCCATT ACCGATCACG ATACCTTAGC CGGTCTTAAG GAAGCCCACA GCTTCAACGA CAGTCAAGCA GAGCCTCTAA CTCTGATTAA CGGCTGCGAG ATCTCTACCC GCTGGAATAA CTTCGATATT CATATCGTCG CCTTGAATAT TGACCCTGAA CATCAGGGGC TGGATACCTT CCTGACCCAG CAGAGGGCCT TGCGTGAGGC GCGGGCGATG GAGATAGGCG TGCGCCTGGA GAAGGCGGGC ATCAGCGGCG CCTATGAAGG GGCTAAGGCG TTAGCCGAAG GTGCTGCGCT GAGTCGTGGC CATTATGCAC GCTGGCTGGC GGACAACGGC TATGCTACCA ATGCTGCCGC CGTGTTCAAG AAATACCTGG CCCGGGGCAA GACAGGCTAT GTGCCAAACA ATTGGTCTGA CATGGAAACC GCTATCGCCA TCATTCATGA GGCGGGCGGC GTCGCCGTGC TGGCACATCC TAGCGGCTAC AAGTTGTCGG CCAAATGGTT AAAGCGTTTG GTGCGTGAAT TTAAGGCCGC CGGTGGCGAT GCCATGGAAG TGGTGCTGGG GCAGCAGACC CTGGACGATC GTAACAACTT AATAGCCTTG AGTCGGCTAA ATGAACTGCA TGCCTCGCTG GGAAGCGATT TTCATTTTCC CGGTAGCTGG CTCGAGTTAG GTAGAAATAT GTTCCAACCC CAAGGTGTCG ATTGGGTGTG GCAAATGGAT AATTGGATGG GAAACCCATG A
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Protein sequence | MTDETRLIDL HSHTTASDGQ LTPSELVARA LDNGVQMLAI TDHDTLAGLK EAHSFNDSQA EPLTLINGCE ISTRWNNFDI HIVALNIDPE HQGLDTFLTQ QRALREARAM EIGVRLEKAG ISGAYEGAKA LAEGAALSRG HYARWLADNG YATNAAAVFK KYLARGKTGY VPNNWSDMET AIAIIHEAGG VAVLAHPSGY KLSAKWLKRL VREFKAAGGD AMEVVLGQQT LDDRNNLIAL SRLNELHASL GSDFHFPGSW LELGRNMFQP QGVDWVWQMD NWMGNP
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