| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2248 |
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| Symbol | |
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| ID | 4922884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2627276 |
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| End bp | 2628064 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163833 |
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| Product | chromosome segregation and condensation protein ScpA |
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| Protein accession | YP_001094373 |
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| Protein GI | 127513176 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1354] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00439648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGGGA CTCAGCAAAG TTTACCTTTG GCCGTGGTCA GGGGCGAGCC CGTTAAGGAG
CTGCCGGCGG ATCTCTTTAT TCCGCCCGAG GCGCTAGAGG TGTTTCTCGA GTCTTTCGAA
GGCCCGCTGG ATCTGCTGCT CTATCTGATC CGTAAGCAGA AACTGGATGT GGTCGAGATG
GCCATTGCGC CGGTGACGGA TCAATATCTT GAGTATATCG AGCTGTTGCA GGGGGCCAGG
GTGGAACTAG CCGCCGACTA TCTGGTGATG GCCGCCACCC TGGCCGAGAT CAAGTCGCGC
CTCTTGCTGC CAAGACCCGA ACTTGCAGAG GAAGATGAGG CCGATCCCCG TGCCCAGCTG
ATCAGACAGC TTAAGGCCTA CGAGGTGATT AAAGACGCGC AGCAAAGGCT AGATGCCTTG
CCGCGACTCG AGCGAGATGT GTTTCAGGCT AAGGTGTTGC CGGCGCCTGA TATCAAGCCT
GTGTTAGTGC CGCCGTCTGT TTCTCTAGTG GAGTTGGCCG GTGCCTTTGC CGCCGTGTTA
AAGCGGGTCG AGGCCACAGA GCATCACCAT GTGCAGCGTG AGCATCTGTC GACACGGGAA
CGCATGACGC AAATATTGGC TATGCTAGAA GGCAAGTCCT ATGTGCCTTT TGAGCAGCTA
TTTGATGTTT CTGAGGGGCG AGCTGGCGTG GTGGTGAGCT TTCTTGCGCT GATGGAGCTG
GTGAAAGAGC TTTTGGTCGA TCTGATCCAG GCGCAGCCGC TGTCGACCAT ACATGTTAGG
GCCTATTGA
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| Protein sequence | MQGTQQSLPL AVVRGEPVKE LPADLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVEM
AIAPVTDQYL EYIELLQGAR VELAADYLVM AATLAEIKSR LLLPRPELAE EDEADPRAQL
IRQLKAYEVI KDAQQRLDAL PRLERDVFQA KVLPAPDIKP VLVPPSVSLV ELAGAFAAVL
KRVEATEHHH VQREHLSTRE RMTQILAMLE GKSYVPFEQL FDVSEGRAGV VVSFLALMEL
VKELLVDLIQ AQPLSTIHVR AY
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