| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2229 |
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| Symbol | hemH |
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| ID | 4923225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2605318 |
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| End bp | 2606331 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163814 |
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| Product | ferrochelatase |
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| Protein accession | YP_001094354 |
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| Protein GI | 127513157 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
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| TIGRFAM ID | [TIGR00109] ferrochelatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0013566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00122405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATAAAG TCGACAACTT ATCTCCCGCT AAGCTTGGTG TCTTGCTGGT TAATCTCGGC
ACACCCGATA CACCAACGCC TAAAGATGTA AAGCAGTTCT TAAAACAGTT TCTCAGCGAC
CCGCGCGTGG TCGATCTAAA TCCCTGGATC TGGAAACCCA TACTCAATGG CATCATATTA
AATACGCGCC CCAAGGCCGT AGCCAAGCTC TATGAGTCTA TCTGGTGGCC CGAGGGCTCG
CCTCTGATGG TGATCAGTGA GCGCCAACGT GAAGCGCTGA GTGCGATTCT AAAAGCGCGT
CATGGTAGCG ATATTCCGGT GGAGTTGGGG ATGAGTTATG GCAATCCCTC ACTGTCGTCG
GGGATAGACA AGCTGGTGGC TCAGGGTGTT GAGCGCCTGG TGGTGCTGCC GCTATATCCT
CAGTATTCCT GCTCCACCGT GGCACCGGTA TTCGATGCCA TCGCCAGTGA CTATAAGGGC
AGACGCAACT ATCCTGAGAC CCGCTTCAGT AAAGAGTATT TCGAGCACCC GGCCTATATC
GCGGCGCTGG CAGGTTCTGT GCGGCGTCAT TGGCAAGATA AGGGCCAGGG CGATTGCCTC
TTGATGTCCT TTCATGGCGT GCCCCTGCGT TATGTGACCG AGGGTGACCC CTATCAGCGT
CAGTGTCAAC GTACTGCCGA GCTGCTGGCC GCGGCCTTGG GGCTTACAGA GTCTCAGTGG
CGCCTGTGTT TTCAATCGAA ATTTGGTAAG GAGGAGTGGC TGACGCCGGC AACGGATGCG
CTGCTCGAGA GTTTGCCGGG TAAGGGGGTT AAGCGCGTGG ATATTCTCTG TCCGGCCTTT
GCCGTGGATT GTTTGGAGAC GCTTGAAGAG ATCTCCATTG GCGGCAAGGA GAGCTTTATC
GAGGCCGGCG GTGAGGACTA TCATTTCATC CCTTGTTTGA ACGAGGATGA AGCGCATATG
CAGCTGCTCG CGGACTTGGT CGATCAACAG GCGGCGGGCT GGCTTAAATC TTAA
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| Protein sequence | MNKVDNLSPA KLGVLLVNLG TPDTPTPKDV KQFLKQFLSD PRVVDLNPWI WKPILNGIIL
NTRPKAVAKL YESIWWPEGS PLMVISERQR EALSAILKAR HGSDIPVELG MSYGNPSLSS
GIDKLVAQGV ERLVVLPLYP QYSCSTVAPV FDAIASDYKG RRNYPETRFS KEYFEHPAYI
AALAGSVRRH WQDKGQGDCL LMSFHGVPLR YVTEGDPYQR QCQRTAELLA AALGLTESQW
RLCFQSKFGK EEWLTPATDA LLESLPGKGV KRVDILCPAF AVDCLETLEE ISIGGKESFI
EAGGEDYHFI PCLNEDEAHM QLLADLVDQQ AAGWLKS
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