| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2227 |
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| Symbol | |
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| ID | 4923223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2602359 |
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| End bp | 2603678 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163812 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001094352 |
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| Protein GI | 127513155 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.49503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00495377 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGGCA CGCAAAACAA AAAATTAGGC CTCACCGGAA AAATACTCAT TGGTATGGCC
GGAGGCATTT TAACCGGGCT ACTGCTACGC AGTTTTTTCC CCGGTAGTGA GTTTATCGAA
GAGTATATTA CTAACGGCTT ATTGAACGTG GTCGGCAGTA TTTTTATCTC AAGTTTACAG
ATGTTGGTCG TCCCTCTGGT CTTCATCTCT CTGGTATGTG GTACCTGCTC GCTAAGTGAC
CCATCATCCC TTGGCAGGCT AGGCGGAAAA ACCATCGCTT TTTATCTGTT TACCACGGCG
ATTGCTCTTT CTATGGCCAT TTTGGTCGCG CTGCTCGTTC ATCCAGGTAA TGCCTCGCTA
GCGGCAGAGA ACATGCAGTA CAGCGTTAAA GAGGCCCCTA GCCTTTCGGA CGTATTGATC
AACCTGGTTC CCCGCAACCC GATACAGGCA ATGACAGAGG GGAATATGCT GCAGATCATC
ATCTTTGCAG TGATCTTTGG CTTTGCCATT TCCCATATTG GCGAGCGCGG CAAACGTGTA
TCGGCACTAT TTAATGACTT AAATGAAGTG ATCATGCGTG TGGTTACCCT CATCATGCAG
CTAGCCCCCT ACGGTATATT TGCCCTCATG GGTAAACTCG CCTTAACCTT AGGTCTCGAG
ACATTTGAAA GCGTCGTTAA ATATTTCATG GTAGTACTGG CGGTGTTATT AGTGCACGCC
TTCGTGAGCT ACCCTGTGCT ATTAAAACTC TTCTCCGGAC TCAGTCCCTT TACCTTTATT
CGTAAGATGC GTGATGTGCA GCTGTTCGCC TTTAGTACGG CCAGTTCAAA TGCCACGCTG
CCAGTGACAC TAGAGACCTC TGAGCACCGT CTAGGGGTGG ATAATAAGGT TGCCTCTTTC
ACTCTGCCGC TGGGCGCCAC CATTAACATG GACGGTACGG CGATTATGCA GGGTGTCGCC
ACAGTCTTTA TCGCCCAGGT ATTTGGTATC GATCTCACCA TCACCGACTA CGCCATGGTG
GTTGTCACAG CAACCCTCGC CTCTATCGGC ACGGCGGGCG TTCCAGGCGT CGGTCTTATT
ATGCTGGCAA TGGTACTTAA TCAGGTGGGT CTGCCTGTTG AGGGTATCGC CCTTATCATG
GGGGTCGACA GACTGCTGGA TATGGTGCGC ACCGCGGTCA ACGTGACTGG CGACTCGGTG
GCGACTGTGA TCATCGCCAA ATCGGAAAAT GCCTTTAACC AGGCAACCTT CGATGATCCT
CAAGCAGGTA AGACGGCGGG CAGCTTCGTC GATCAGGTAA ACGCCGAGCT CAAAGAATAA
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| Protein sequence | MAGTQNKKLG LTGKILIGMA GGILTGLLLR SFFPGSEFIE EYITNGLLNV VGSIFISSLQ
MLVVPLVFIS LVCGTCSLSD PSSLGRLGGK TIAFYLFTTA IALSMAILVA LLVHPGNASL
AAENMQYSVK EAPSLSDVLI NLVPRNPIQA MTEGNMLQII IFAVIFGFAI SHIGERGKRV
SALFNDLNEV IMRVVTLIMQ LAPYGIFALM GKLALTLGLE TFESVVKYFM VVLAVLLVHA
FVSYPVLLKL FSGLSPFTFI RKMRDVQLFA FSTASSNATL PVTLETSEHR LGVDNKVASF
TLPLGATINM DGTAIMQGVA TVFIAQVFGI DLTITDYAMV VVTATLASIG TAGVPGVGLI
MLAMVLNQVG LPVEGIALIM GVDRLLDMVR TAVNVTGDSV ATVIIAKSEN AFNQATFDDP
QAGKTAGSFV DQVNAELKE
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