| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2219 |
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| Symbol | |
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| ID | 4923040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2591703 |
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| End bp | 2592629 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163804 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094344 |
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| Protein GI | 127513147 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4067] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0902301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0781423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAGAA TGTTGACCTT GAGAATGTTG ACCTTGAGAA CATTGAGCCC TAAAGCGTTG
ACCAAAGCAT TAACGTTAGT GGCACTATTT CTGCTGGCGC CAGCCTATGG CGACGATAAA
GCCGTTATTG GCCAGACTGC CATGATGACG GTCGATGAAG CCGGGCTCGT CTATCAAGCC
CGTATCGATA CCGGCGCAGG TAATACCTCC TTGCATGCCT TCGACCTTGA GATCCAAGGG
GGCAGCGCCA AGAAGATGGC TGACAATGTG GGTAAGACCA TCTGGTTTAC CACAGAAAAT
GTTGCCGGTG AGCGTAAGCG TTTGAGTGCC AAGATAGTTA AAACCTCCAC CGTCAGCAAC
TCTCAGGGTA CTGAGACCCG TTACATGGTG GAGATGCACG TCGGTTTTGC CGGTGAGACC
CGCAAGGTCA AGGTAAACCT CAGAGACAGA GGTCACATGG ATTACAAGCT GCTGATCGGC
CGTAACTGGC TAAAAGGCAA GTATGTGGTG GATGTGTCTG AAAAGCGTGT GATAGGTGCC
AGAGCCCCCA TCAGCATCCT GGAGACTGGC CTCTTGTTTG ATACCCGCAT CGATACCGGC
GCGGTAGAAA ACTCGCTACA CGCGGTGGAT CTTAAGGTGG AAAATGGCGT CGAAGATATG
GAGCAGAATG TCGGTAAGAT GCTCGCTTTC ACCACGGAAA ACGAGAAAGG TGAAACAAAA
CGTGTCCATG CCCGTATCGT CGAAACCTCG CTTATTCGCA ATGCCCAGGG CAGTGAGGTG
CGCTACATGG TGGAACTCAA TGTGGGTGAG CCGGGCAGGG AGTATAAGGT CAAGGTGAAC
CTGAGAGACC GTACAAAGAT GACCAACAAG CTCTTGATAG GTCGTAACTG GTTGCAAGGC
CACTATCTGG TCGACGTCGC GAAGTAA
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| Protein sequence | MIRMLTLRML TLRTLSPKAL TKALTLVALF LLAPAYGDDK AVIGQTAMMT VDEAGLVYQA
RIDTGAGNTS LHAFDLEIQG GSAKKMADNV GKTIWFTTEN VAGERKRLSA KIVKTSTVSN
SQGTETRYMV EMHVGFAGET RKVKVNLRDR GHMDYKLLIG RNWLKGKYVV DVSEKRVIGA
RAPISILETG LLFDTRIDTG AVENSLHAVD LKVENGVEDM EQNVGKMLAF TTENEKGETK
RVHARIVETS LIRNAQGSEV RYMVELNVGE PGREYKVKVN LRDRTKMTNK LLIGRNWLQG
HYLVDVAK
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