| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2213 |
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| Symbol | |
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| ID | 4923034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2582237 |
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| End bp | 2583172 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163798 |
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| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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| Protein accession | YP_001094338 |
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| Protein GI | 127513141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.354221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.272454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTAGAA AACCTAAGTA TTTCGATCGC CGCTTTCGCG CCGAGTTATT ACATCCTAAG
CATTGGCCCA CCTGGTTTGC TATAGGGGTG CTGGTGTTTT TCGGCCTGAT GCCCGCCTGG
CTAAGGGATC CGATAGCGCG CCTGCTTGCG CGTCTGGTGA AGAAGATCGC CAAGAAGCCT
CTCAAGGTGG CTAGGGCAAA CCTGGAGACC TGTTTCCCGG ATAAATCAAA GGCTGAGATC
GATAAGCTAC TCGATGAGAA TATCGAGAGT TTTGTATTGA TCCTGTTGGC GCAGTCAGAG
CTGTTGCTGC GCTCAGATGC TAATCTGCGT CGCCGCGTCC AGCTTGACGG CTTCGAGCAT
GTGCAGCGCG CTCGTGATGC CGGTCAGCCG GTGATCTTCA TCATGCCCCA TGTATGGGGC
ATAGAATATG CTGGGCTCAG GTTGAACCTG GAGCTCCCCA TGGTGACCAT GGCCAAGGCT
CATCGTAACA AGTTGTTCGA CTGGTTCAAT AACCGCATGC GAAGCTCCAA GGGCGGCAAC
GTCTATATGC GCGAGGCGGG TATACGTGCG CTCCTGTCTG AGCTGAAAAA CGATAACAGC
TTCTTCTATC TGCCAGATGA AGACTTAGGC CCTGAGAAGA GTGTCTTCGC GCCATTTCTA
GGCACTGTTA AGGCTACTCT GCCTGTAGTG GGGCGTCTTG CCTCGGCCGG TAATGCTCAG
GTGATGCCGG TGAAGATTGG CTATGATCAG CAAAAGCGTC AGTATCTGCT AACGGTACTG
CCGCCCATCT CACCCGAGGA GATGCAAGGC AAGGAGAATG AGGCCTTAGC ATTAAACCGT
GCGGTGGAGC AGGTGATAAA CGCCTATCCA GAGCAATATA TGTGGTTCCT CAAACTCCTG
CGTACCCGTC CGCCGGGCGA AGCCTCTCTC TACTAG
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| Protein sequence | MSRKPKYFDR RFRAELLHPK HWPTWFAIGV LVFFGLMPAW LRDPIARLLA RLVKKIAKKP
LKVARANLET CFPDKSKAEI DKLLDENIES FVLILLAQSE LLLRSDANLR RRVQLDGFEH
VQRARDAGQP VIFIMPHVWG IEYAGLRLNL ELPMVTMAKA HRNKLFDWFN NRMRSSKGGN
VYMREAGIRA LLSELKNDNS FFYLPDEDLG PEKSVFAPFL GTVKATLPVV GRLASAGNAQ
VMPVKIGYDQ QKRQYLLTVL PPISPEEMQG KENEALALNR AVEQVINAYP EQYMWFLKLL
RTRPPGEASL Y
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