| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2212 |
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| Symbol | |
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| ID | 4923033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2579958 |
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| End bp | 2582120 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163797 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_001094337 |
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| Protein GI | 127513140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT CTATCCTCAC TACGGCTATC TTAGCCGGTC TATATCTCAC TGGCTGTACA
CCAGCGAGTC AGGAAGCAAT CAATACAGAA GTAGCAAGTA CCGAAGCGGC GAAGCCTGCC
GTACAGGCGA GTGAAGGCCA AATCAATGCC AGCAACGTAC TGCTCAAGAA GAGCGTGTTA
CAGTATCAGG CGCCTGAGTT TGATAAGATC ACCTTCGACG ATTATGCCCC CGCCTTCACC
CAAGGGATCA TAGAGCACGA TAAAGAGATC CAGGCGATCA TCGACAACCA AGCAGCCGCA
GATTTTGACA ACACCATAGT TGCCATGGAA AAGTCTGGCA GCCTGCTTAC CCGCGTGGCC
AAAACCTTCT TTAACCTGGC CAGCGTTAAC TCTAACAGCC AGGTACAAAC CCTGGAAGCC
GAGCTAGCAC CTAAGCTGTC TGCGCACTGG GACAACATCT TCTTAAACCC TGAGCTGTTT
GCCCGCGTCG AGAGCGTCTA CAAGAGCCGC GACAGCCTGA GCGCCGAAGA TAAACACTTA
GTCGAATATT ACTACCTGGC ATTCGAGCGC GCCGGTGCCA AGCTATCTGA CGCAGATAAA
GAGAAGATGC GCGATCTTAA CGGTCAGCTC GCCAGCCTGA CCACAGAGTT TTCTAAGAAC
GTTCTCGATT CATTTAAAAA CGAAGTGATC ATAGTTAAAG ACAAGGCGGA GCTCGACGGC
CTATCTGACG CCGAAATCGC TACCCTCGCC CAAGCCGCAA AAGATGCCGG CAAAGAGGGA
TACCTGATCA CCCTAGTGAA CACCACTCGC CAACCTATCC TCTCCAGCCT GAATAATCGC
GAGCTAAGAG AGAAAGTGTG GAAGACCTCG GCAAACCGCG CCATGGCGCT TAACGGCCCA
AATATCGTCA AGCAGTCACA CCTGCACGCC GAAAAGGCGG CGCTACTTGG CTATGACTCC
TGGGCAGCCT ACACGGTAGC CGATCAGATG GCCAAGACAC CGACGGCCGT GTATGAGATC
TTAGATGACC TAGCCCCTAA GGCTGTGGCC AAGGCCAAGC TAGAGGCGGC GGACATCCAG
GCGCAGATTA AGGCATCGGG TCAAGACTTC GAACTGGCAC CTTGGGACTG GGCCTATTAC
AGTGAGAAGG TTCGTAAAGC CAAATACGAC CTGGATCAGA GCCAGGTCAC GCCTTATTTC
GAGTTTAACC GCGTCCTCAA CGACGGTCTG TTCTTCGCCA TGGAGAAACT CTACGGCATC
ACGGTCAAGC CGCGCAAGGA TCTGCCTGTA TGGAACCCAG ATGTGCTGGC CTATGAGATC
TTTAACAAAG ACAAGAGCTC TATCGGCATC TTCTATCTGG ACCCTTATGC CAGAGAAGGT
AAGAACGGTG GCGCCTGGAT GGATGAGTTC GTAACCCAAA GCGGCCTACT AGGCACTAAG
CCTGTGGTCT ACAATGCGCT GAACATTCCA AAGCCGGCTT CAGGCCCAAC CCTGATGACC
TATGATGAAG TGAGCACCAT GTTCCACGAG TTCGGTCACG CTGTGCATGG TCTCTTCTCT
CAGGTGAAAT ACCCAAGTGT GGCGGGTACG GCTACCCCGA GAGACTTCGT CGAATTCCCA
TCACAGGCCA ACGAAGACTG GTCAATCGAT CCTGAAGTCC TGGCCAACTA CGCCAAGCAC
TATCAGACCG GCGAGCCTAT CCCTGCCGAG CTGCTGAAGA AGGTCCTGGC GGCGAGCAAG
TTTGGACAAG GCTTCGATAC TACAGAGTAT CTGGCGGCGG CCATCCTGGA CATGGAGTGG
CACTCAATTG GTGTCGATGC CAAGATCGAC GACGTGGCTA AGTTTGAGCA GCAAGCTCTG
GCTAAACACG GCATCGACTT TGCGCCTATC CCACCTCGCT ACAAGTCAGC CTACTTTAGC
CATGCATTCG CCGGCGGCTA TTCGGCAGGC TACTACGCCT ACCTGTGGAC CGAGGTCTTT
GCGGCAGACG CCTTCGACTT CATGAGCCAC AACGGCGGCC TGTCACTGGA GAACGGCAAC
AAGTTCCGCG ACAACGTGCT GTCTAAAGGT AACAGTGAAG ATCTGATGCA GGACTACATC
AAGTTCACCG GCAGAAAGCC AACCGTGGAT GCCCTGCTAA AACACAGAGG CCTAACGGAA
TAA
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| Protein sequence | MRKSILTTAI LAGLYLTGCT PASQEAINTE VASTEAAKPA VQASEGQINA SNVLLKKSVL
QYQAPEFDKI TFDDYAPAFT QGIIEHDKEI QAIIDNQAAA DFDNTIVAME KSGSLLTRVA
KTFFNLASVN SNSQVQTLEA ELAPKLSAHW DNIFLNPELF ARVESVYKSR DSLSAEDKHL
VEYYYLAFER AGAKLSDADK EKMRDLNGQL ASLTTEFSKN VLDSFKNEVI IVKDKAELDG
LSDAEIATLA QAAKDAGKEG YLITLVNTTR QPILSSLNNR ELREKVWKTS ANRAMALNGP
NIVKQSHLHA EKAALLGYDS WAAYTVADQM AKTPTAVYEI LDDLAPKAVA KAKLEAADIQ
AQIKASGQDF ELAPWDWAYY SEKVRKAKYD LDQSQVTPYF EFNRVLNDGL FFAMEKLYGI
TVKPRKDLPV WNPDVLAYEI FNKDKSSIGI FYLDPYAREG KNGGAWMDEF VTQSGLLGTK
PVVYNALNIP KPASGPTLMT YDEVSTMFHE FGHAVHGLFS QVKYPSVAGT ATPRDFVEFP
SQANEDWSID PEVLANYAKH YQTGEPIPAE LLKKVLAASK FGQGFDTTEY LAAAILDMEW
HSIGVDAKID DVAKFEQQAL AKHGIDFAPI PPRYKSAYFS HAFAGGYSAG YYAYLWTEVF
AADAFDFMSH NGGLSLENGN KFRDNVLSKG NSEDLMQDYI KFTGRKPTVD ALLKHRGLTE
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