| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2203 |
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| Symbol | |
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| ID | 4923117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2563418 |
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| End bp | 2564191 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163788 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001094328 |
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| Protein GI | 127513131 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.132932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCA AACGCATAGT TCCCTGTCTG GATGTCCGTG ACGGTAAGGT GGTCAAGGGG
GTTCAGTTTC GTAACCATGA GATCGTCGGC GACATAGTAC CCCTGGCCGC ACGCTATGCC
GCTGAGAGCG CCGATGAGCT GGTATTTTAC GACATCACCG CCAGCGCCCA CGACAGAGTG
GTGGACAAGA GCTGGGTCAG CCGCGTCGCC GAGCAGATAG ATATCCCCTT CTGCGTCGCC
GGCGGCATCA AGAGTATCGA GCAGGCGCGG GAAAAGCTGG CGTTCGGCGC CGATAAGATC
TCGATAAACT CGCCGGCGCT TAGCGATCCC GGCCTGATCG ACCGCCTGCA GGATGAGTTT
GGCCGCCAAT GTATCGTGAT AGGCATAGAC TCTTACTATG ATGCCGACAC CGACAGCTAC
AAGGTGAAGC AATTTACCGG TGACGAGGCC GCCACCAAAG ATACCCAGTG GTACACCCAA
GACTGGGTGG AAGAGGTGCA GAGACGTGGC TGCGGCGAGA TAGTGCTGAA CGTGATGAAC
CAGGATGGCG TTCGTCAGGG CTATGACATC AAGCAACTCG CCATGGTGCG CGCCATCTGC
GACGTGCCTC TCATCGCCTC AGGCGGCGCC GGCACCATGG AACACTTCCT CGAGGTGTTC
ACCCAGGCGG GTGTGGATGC GGCCCTCGCG GCCAGCGTCT TTCACAAAGG GATCATAGAG
ATAGAGGCGC TTAAGCGATA CCTGCTCGAC AATGGTGTAC AGATGCGCCT GTAA
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| Protein sequence | MLAKRIVPCL DVRDGKVVKG VQFRNHEIVG DIVPLAARYA AESADELVFY DITASAHDRV
VDKSWVSRVA EQIDIPFCVA GGIKSIEQAR EKLAFGADKI SINSPALSDP GLIDRLQDEF
GRQCIVIGID SYYDADTDSY KVKQFTGDEA ATKDTQWYTQ DWVEEVQRRG CGEIVLNVMN
QDGVRQGYDI KQLAMVRAIC DVPLIASGGA GTMEHFLEVF TQAGVDAALA ASVFHKGIIE
IEALKRYLLD NGVQMRL
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