| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2202 |
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| Symbol | |
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| ID | 4923116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2562699 |
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| End bp | 2563436 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163787 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001094327 |
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| Protein GI | 127513130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCC CTGCAATCGA TCTCATCGAG GGCCAAGTGG TGCGTCTCTA TCAAGGCGAT
TATGCCCAGC AGACCACCTT CGATCTGAGC CCGCTCGCCC AGCTACAGGC CTATCAGGCC
CAAGGCGCCA CCTGGCTGCA TATCGTCGAT CTGACCGGTG CAAAAGACCC TGACAGACGC
CAGACCCGAC TCATAGGTGA ACTGGTCGAG AATCTCGAGG CCAACATTCA GGTCGGCGGT
GGCATTCGCA GCGAGGCCCA GGTCAAGGAG CTGTTAGATC TCGGGGTCAA GCGAGTGGTG
ATAGGCTCCC TCGCCGTCAA ACAGCCAGAG CTGGTGCAAT CCTGGCTCGA GACCTATGGA
AGTGATGCCA TCTGCCTGGC ACTGGACGTG AATATTAACC AGGCGGGTGA GAAGATAGTC
GCCGTGTCTG GCTGGCAGAG TGGCGGCGGT AAGACGCTGG AATCTCTGGT GGCCACCTTC
GCCCCCTATG GGCTCAAGCA CGCCCTGGTT ACCGACATCA GCCGTGACGG CACACTGCAA
GGCAGCAATA CCCAGCTCTA TCAGGAGATC GTAGCGCGTT ATCCCGATAT TGAGTGGCAG
GCCTCGGGCG GTATCGCCAC CCTGGACGAT GTGAGCGCCG TGCGTAATAG CGGCGCCAGC
GGCATCATCA TAGGCAAGGC CCTACTCATC AACAACTTTA CCGTGCAGGA GGCGATCGCA
TGCTGGCCAA ACGCATAG
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| Protein sequence | MIIPAIDLIE GQVVRLYQGD YAQQTTFDLS PLAQLQAYQA QGATWLHIVD LTGAKDPDRR
QTRLIGELVE NLEANIQVGG GIRSEAQVKE LLDLGVKRVV IGSLAVKQPE LVQSWLETYG
SDAICLALDV NINQAGEKIV AVSGWQSGGG KTLESLVATF APYGLKHALV TDISRDGTLQ
GSNTQLYQEI VARYPDIEWQ ASGGIATLDD VSAVRNSGAS GIIIGKALLI NNFTVQEAIA
CWPNA
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