| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2201 |
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| Symbol | hisH |
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| ID | 4923115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2562028 |
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| End bp | 2562702 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163786 |
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| Product | imidazole glycerol phosphate synthase subunit HisH |
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| Protein accession | YP_001094326 |
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| Protein GI | 127513129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0635435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACC CTGATACCAT CATCATAGAT ACCGGTTGCG CTAATTTGAG CTCGGTGCGT
TACGCCTTCG AGCGGATCGG CGCCGACGTC GAGGTGAGTG ACGATATCGA CAAGATAAAG
GCGGCCACCC GAGTCGTGTT GCCGGGCGTT GGTACCGCCA GGGCCGCCAT GAAGGCGCTG
AAGGACAAGA AGCTTATCGA CACCATCTGC TCCCTCACCC AGCCTGTGCT CGGCGTCTGC
CTCGGCATGC AGATGCTAAC CAAGGCCTCA CAGGAGCGCG GTGGCTTAAG TTACGGGAAT
AGTAGCAAGG ACTGTCAGTG CCTTGGGCTG ATCGACACTA ATATCGAGCA GCTGGACGCA
AAGGGCCTGC CGCTACCCCA CATGGGCTGG AATCAGATAA GTCCGAGCGA GCACCCGCTG
TTTGCCGGGG TTGCCGAGGG CAGCTATGTC TATTTCGTTC ACAGCTACCG GGCACCGCTG
GGTGATTTCA CCATCGCCAA GTGCGAATAT GGCGAGGGTT TTAGCGCCGC CATCGCAAAA
GATAACTTCA TGGGGGTGCA GTTCCACCCG GAAAAAAGCG CCGCGGTGGG CGCCACCATA
TTAAGAAACT TTATGAAAAT GAATGCCGGC AGCTTTGCAG GTAACCACAA ATCTACACAG
GAGAGCGCCC AATGA
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| Protein sequence | MSNPDTIIID TGCANLSSVR YAFERIGADV EVSDDIDKIK AATRVVLPGV GTARAAMKAL
KDKKLIDTIC SLTQPVLGVC LGMQMLTKAS QERGGLSYGN SSKDCQCLGL IDTNIEQLDA
KGLPLPHMGW NQISPSEHPL FAGVAEGSYV YFVHSYRAPL GDFTIAKCEY GEGFSAAIAK
DNFMGVQFHP EKSAAVGATI LRNFMKMNAG SFAGNHKSTQ ESAQ
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