| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2198 |
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| Symbol | hisD |
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| ID | 4923112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2558481 |
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| End bp | 2559812 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640163783 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_001094323 |
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| Protein GI | 127513126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0308106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAA ACACCATGAC ATCCACACAG ATGCAGCGCC TCGACTGGCA GGCGCTCAAT
GACCAGGCAA GACGCGAGGC CCTGTCACGC TCGCCCCTGA TTGGCGACGC CAACCTTGAG
CAGCAGGTCA AGGCGATCAT CGACCAGGTG GCCAGCCAGG GCGACGTGGC GCTAAAAGCC
TTCTCACAAA AATTCGATAA GGTAGAACTC GACGCCCTGC GCCTTAGCGA TGCGGCGATA
GCAGCCGCCA GCGAGCGAGT GACGCCCGAG ATCAAGGCAG CTATCGAGCA GGCCAAACAG
AACATCGAGA CCTTTCACCA GGCCCAGGCC TTCAAGGGGA TCGACCTTGA GACCCAAGCC
GGGGTGCGCT GCGAGCTGCG AAGCGAGCCA ATCGAAAAGG TGGGCCTCTA TATTCCCGGT
GGCAGTGCGC CGCTCATCTC TACCGTGCTC ATGCTGGCAC TGCCGGCCAA GATAGCCGGT
TGTGAGCAGC GGGTGTTGGT CAGCCCACCA CCGATCGACG ATGCTATCGT CTACGCTGCT
AAGGCCTGTG GCATCACAGA TATCTATCAG ATAGGCGGCG CCCAGGCGAT CGCCGCCTTA
GCGCAGGGGA CAGAATCTGT GCCTGCGGTC GATAAGATCT TCGGCCCGGG CAACCGCTAT
GTTACCGAGG CCAAGCGCTT AGTTGCCCAG GACAGCCGCT GCGTGGTGAG CATAGACATG
CCCGCCGGCC CCTCAGAGGT GCTTGTGATC GCCGATAACG AGGCGAATCC CGACTTCATC
GCCGCCGATC TCCTCTCTCA AGCCGAGCAC GGCCCCGACT CTCAGGTGAT GCTGGTCACC
GACAGCCAAA CCTTGGCAGA CGCGGTCAAC CAGAGCCTTG GCGAGCAACT GGCAAGACTG
CCCAGGGCCG AGATCGCCAT GCAGGCCCTG AGCGCCAGTC GCACCTTGAT TGTCGAGGAT
ATGGCCCAGG CCGCCGAGGT TTCTAACCGC TATGGCCCTG AGCACCTGAT CATTCAGACC
CGCGCCCCCC GTAAACTGCT GAGTAAAATC CGCGCCGCCG GTTCGGTATT TCTTGGCGCC
TACACACCAG AGTCCGTTGG CGATTACGCC AGCGGCACCA ATCACGTGTT GCCAACCTAT
GGCTATAGCC GCGCCGTCTC CAGCCTGTCG CTGGCCGACT TTAGCCGCCG CTTCACCGTG
CAGGAGCTGA GCGCCGAGGG CTTGCGCGGC CTAGGCGAGT GCGTGATGAC CCTGGCCAGC
GCCGAGCAGC TCGATGCCCA CAGAAATGCC GTCGCCGTGC GCCTTGCCAC GCTAACGGGC
GAGGAGAAAT AA
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| Protein sequence | MTTNTMTSTQ MQRLDWQALN DQARREALSR SPLIGDANLE QQVKAIIDQV ASQGDVALKA
FSQKFDKVEL DALRLSDAAI AAASERVTPE IKAAIEQAKQ NIETFHQAQA FKGIDLETQA
GVRCELRSEP IEKVGLYIPG GSAPLISTVL MLALPAKIAG CEQRVLVSPP PIDDAIVYAA
KACGITDIYQ IGGAQAIAAL AQGTESVPAV DKIFGPGNRY VTEAKRLVAQ DSRCVVSIDM
PAGPSEVLVI ADNEANPDFI AADLLSQAEH GPDSQVMLVT DSQTLADAVN QSLGEQLARL
PRAEIAMQAL SASRTLIVED MAQAAEVSNR YGPEHLIIQT RAPRKLLSKI RAAGSVFLGA
YTPESVGDYA SGTNHVLPTY GYSRAVSSLS LADFSRRFTV QELSAEGLRG LGECVMTLAS
AEQLDAHRNA VAVRLATLTG EEK
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