| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2189 |
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| Symbol | |
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| ID | 4923288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2548610 |
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| End bp | 2549545 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163774 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001094314 |
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| Protein GI | 127513117 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00113055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000974583 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATC CGCTAGCCCC TCTGTGTCAG CCCTCAAGTG ATGGCAATGA AGTGATGCTA
TCACTGCCCC ATATTCGTCT CTCTGGTCGG CTGTGGGGGG AGGCGGATAA GCCTCTGCTA
TTGGCGCTGC ACGGTTGGTT GGATAATGCC AACAGCTTTG CGCCCCTGGC GGAGCATTTA
AGCGAGTATC GCCTGCTGGC AATCGATTGG CCGGGCCACG GCGCGTCACA GCACAGGCCC
GGCGGTTATC CGCTGCACTG GATAGACTAC CTCTATGATC TCGAGCTGCT TATCGATGCC
ATAGTGCGTC ATCAGCCCCT GCATGGTGTG ATAGGTCACT CGCTGGGCGG CATAGTGGCC
TCGGCCTACA GCGCCGCCTT TGCCGAGAAG GCCAAGCATT GGATCGTTAT CGAGGCGCTC
GCGCCCCTGT TTGAGGCGCC CGCTAAGAGC AAGCTAAGAC TCAGGCGCAG CTTCGATGCC
CATCAGCGGG CCGCTATGAG TCAGCTTGCA CCTAAGCCTG TGATGCTGGA TGCCGCCGTC
AGGGCAAGGC ATAAACTCAC CGGGCTAGAT ATGCCTTGGT GTAGGCTAAT CCTCGAGCGC
AACCTGCAGC TAACAGACGG TCACTACTAC TGGCGTAGCG ATCCCAGACT CAAACTAGAC
TCCCCCATGA GGCTCGATTT TGACCATGTC AGCGGCCTGA TGCAGGGCCA CGCTGGCAAG
GTGCTGGTCA TTAGAGGCAA AGAGGGTTAT CCCCTGATGG GCTATCACCA GACAGAAAAG
GTGTCTGAAG CCCATGATAC CGCTGGCGAA GATCTATGCG AAACCGCCGC TTCTTGGTAT
CAAGATCTCA CCCAGGTGAC CCTCGAAGGT GACCATCATC TCCATATGGG CAATAGCCTG
GAGGTGGCTG CGGCAATTAA GGCATTTTTA GCGTGA
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| Protein sequence | MSDPLAPLCQ PSSDGNEVML SLPHIRLSGR LWGEADKPLL LALHGWLDNA NSFAPLAEHL
SEYRLLAIDW PGHGASQHRP GGYPLHWIDY LYDLELLIDA IVRHQPLHGV IGHSLGGIVA
SAYSAAFAEK AKHWIVIEAL APLFEAPAKS KLRLRRSFDA HQRAAMSQLA PKPVMLDAAV
RARHKLTGLD MPWCRLILER NLQLTDGHYY WRSDPRLKLD SPMRLDFDHV SGLMQGHAGK
VLVIRGKEGY PLMGYHQTEK VSEAHDTAGE DLCETAASWY QDLTQVTLEG DHHLHMGNSL
EVAAAIKAFL A
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