| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2178 |
|---|
| Symbol | |
|---|
| ID | 4923277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2538406 |
|---|
| End bp | 2538651 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640163763 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094303 |
|---|
| Protein GI | 127513106 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.18592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00256574 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGG AAAAATGGAA GCAAGTACGT GCCAAGGGCA AAGCTAGGTT TATCTGGATG
AATGGTTTTT TATTTTGGGG CGTTTCTACT GCAGTGCTAT GGTCAACTTT GATGCAGTTG
TTTCAGCCAC AAGAACCTAT TTGGGTTAGA CCGCTTGTCG CTATTATTGT TTTTCCAGTT
GGCGGTTTAA TTTGGAGCAA TTGGCTTTGG TACTTCTCAG AGCGCAAGTA TCGTAAAAAG
GCATAA
|
|---|
| Protein sequence | MNMEKWKQVR AKGKARFIWM NGFLFWGVST AVLWSTLMQL FQPQEPIWVR PLVAIIVFPV
GGLIWSNWLW YFSERKYRKK A
|
|---|
| |