| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2173 |
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| Symbol | |
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| ID | 4923348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2529518 |
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| End bp | 2533417 |
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| Gene Length | 3900 bp |
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| Protein Length | 1299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163758 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094298 |
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| Protein GI | 127513101 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0467553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGC GGCCAGATGG AATCGACCAA GGGCAGATGA CCCAGGAACA GCCGCTATCG
GCGCAGGGCG GCGAAGCGCC GCCAAGATCT TTGCTATACC GCCTGCTCTG CTGGCTGCGT
AACCTTGTTC GGGTGCTGCT CTATCTGCCA CTGGCCCTGC TCATCCTGCT GGCCATCTTG
ATAGGCACCC CCTTTGGCAG TCGCATCGCG GTCAACCTCG CCGATCTCTT GGTGCCGGAC
TTAAGCCTGA GCTATGGCGG CGGTACCCTC AATGGTCAGC TGCAACTGGA ACACGCTAAG
TGGCAGATGA CGGGCATAGA GGTCGAAACA GAGGGGCTTA GCCTCAACTG GCGCCCCCTG
TGTCTGTTGC AGCGCCAGGT GTGTGTCGAC TCGCTGGGCG CCGATGCGGT GCGGGTCGAT
ATCGATACAG ACCTGCTCAC CGCATCATCG CCAGACGCTG CTCTCAAGGA GAAAGCTGCT
ATTGACGAAA CAAGCGAGCA TGGCCCGCTC ACCCTGCCTA TCGGCATCAT ACTCAACCAG
AGCGACCTCA ATCAGATTAG GGTGCGGGTC AATGAGATGC AGTTTAATGC CGAGCAGCTC
GCGGCCAAGG CCAGCTGGTT AGAGACAGGC CTGAGGGTCA ATCGGCTCGA CAGCAGCGGA
CTATTGGTCT CGATTCCCCT TGGGCAGAGC GAAGATGGTA CTCAGCCAAT CCAGGCAAAA
AATGACCGGC AAGACGCACA GGCGAGCTGG CCCTTGAGTC AGTTGCCCGA GGTTGAGATC
CCCATGCCCA TCTTCGTCGA TGGCGCGCAT CTGGTTGACA GCGAGCTCAG GCTCGGCGAG
CGCATAGACA AATTTGCCGC TATCGATCTG GCCGGCAGTT ACCTTGGCTA TAAGATCACC
GTCGATAGCC TGGCCTTCAG TCATGACTAT GGTAAGGCGC GCCTCGATGG CGAGATGAGC
CTGACTCAAG ACTATCCCAT GGCGCTGCAT CTCGAGGCGG AGTTTAATGC CAACAAGATC
AGCGAGCTGC CGGAACTCAA GAACCAGCGC CTGAACGCCG AGATCAACGG CGGTTTCTCG
GCCCTTGCCG TCAAGCTTAA GGGCGAGGGT CACCTCGAGC TGGATCTCGA CGCCAAAGGG
AATCTGAGCA CGCCTGCAAT GCCCTACGAG ATGACGCTTT CCAGCCGGCA CCTGATGTGG
CCACTTGCCC AGGCGCAATA TGAGGCCAAG GCATTGACCC TTGAATCGAG CGGCAGCCTA
GCGTCCCAAA GTCTCAAACT GACGGGTGAG CTTAAGACGC CTTATCATCC CTGGTTAAGC
CTGAACACCC AGTTGACCCA TCAAGACCAA AACGTCGAGG TGGCTGCGCT TTCCGTCGAC
AGCGAGATGG GCAAGTTGGA TCTTAAGGGC AAGCTGGGTT ACGGCGAGGC GATTAGCTGG
CAGCTCGAGG CCGACACCCA AGACCTAGAT CTTGCCCAGC TGGATGTGAT GCCAGACAAG
CCCCTGCCCG AAACTCAGAT AAGCGGCAGC CTGCATAGTC AGGGACGCTT CAGCGACAAG
CAGTGGTCAG TAGGCATCAG CCAGGCGGAT CTCCAAGGCC AGGTGGATCA ATATCCCCTG
AGACTTCAGG GGGATATCTC CCTGAACGAT AAGTTCCAGC TTAACGCCGA GCATCTGCAA
CTCGACGCCC TTGAGTCGCA GCTCACCCTC TCTGGACGGG TAGATGATGC CTGGGCGCTG
GATGGCCAGC TGAGCGTGCC TGCCCTGAGC CTGTGGGATC CGAGCGCCAG CGGCGCCATC
AAGGCGGTGA TCAACGTCTC GGGCGATGAC GAGCACCCGG AAGTGGCCAT CAACGCCGAC
ACCATAGAGT TTAAGTACGC CGATATCACG GTAGACAAGG CCAAGCTTAT CGCCTTCTAC
CGCCCCCAGG ATGCGCACCA ATTTGCCCTG TCGCTAAAAT CTTCGGGTAT CAAGGGGCAA
GGCATGGCGC TGAGCGACCT CACCTTGGGC TTCAAGGGGG ATATCGCCAA ACAGAAACTG
GGCCTGCAGA CCTATGGTGA CCTGCAGCTA AACACCTCTA TCGCCTCTAC CTTCGACGAG
AAAACCCAGC GCTTCGACGC CAAGATAAAG CGCATCAGCC TCAATTCTCG CCTCGGCGCC
ATGGCGCTGG ATGAACCCTT CGACCTCTAT TGGGATAACA AGCACGCCAA AGGCGAGATC
TCCCCCTTCT GTTGGCGCCA TGACGCCGCC AGCCTGTGCC TCACCGACAC TGCCGAGCTT
GGCGACAAGG GCGATACCCG ATTGCAATTT GCCGGCGATC TCGGCGCCCT GCTGGCACCC
GTGCTGCCGG AAAACCTCAA ATGGAGGGGG CCGACTCAAC TAGATGGCGA GCTGCAATGG
GCCAAGGGCG CCAAGCCCAC AGGTCAGCTG ACACTGGCCA TGGCGCCGGG ACAGTTTGAT
CTCACCACCA CCAAGCGTCA TATCGAGGCC CAGTACCATT ACCTCAACCT CACGGCTCGC
CTGGATGAGC TGCAACTGGC CATCGACACT CAGCTGGAAT CAGAGCGTTT CGCCAAGATA
GACAGTCAGC TCACCATAAG TACCGACCCA GAGCACAGGC TGAGCGGTAA GATAGATCTT
AAAGATATCG ACCTGCATGC CCTGGCCGAC TTTACGCCTC AGCTTGAGGT GCTCGACGGT
AAGGTCTCAA GCGCCATCAT CTTGGGGGGT ACGCTGAATG AACCAGATCT CAGCGGCACG
GTAGATCTCA ACGACGGCCA ACTGGCAGCG GCCGCCAACC CGACCCTGTT AGATAACATC
AAGCTCAAAC TCACCCTGCT GGGGCAGACG GGTCAGGTGA AGGGTCAGTG GACCATGGGC
GATGGCAAGG CCAAGGTAGA TGGTGTGATT GGCTGGCAAG AGGGCCTCAA GGGCGATCTT
AATTTTAGCG GCGACAAGCT GGCCATCATT CAGCCGCCAC TGGCGATACT GGATGTGTCA
CCGGATCTCG ACATCAGCTT TAGCGATAAG CACCTGGATA TTCGCGGCAA GCTGGATGTG
CCCTCTGGCC ATATCAAAAT CGTGCAGCTG CCCGAGGGCG GCGTGGCCGA GTCCAGCGAT
GTGGTGTTCA ATGACAGTTT GGCCAGTCAA GCCCAAGTAA AAGATCCCAT TGCCGTCACC
AGCCAGATAG CGGTCAAGGT AGGCGACAAG CTCACCATAG ACGGCATGGG GCTCAGAGGC
ATGTTAGTCG GTACCCTGGA GCTGCGCCAG GCCGCCTTTA AGCCGCCGCT GCTCTATGGC
GACATCAAGG TGGTTAACGG TAACTACAAA TTTATGGGTC AGACACTGTC GATCAAGGCG
GGCGAAGTGC AGTTTATCGG CCCCATGGCG GTGCCTAACC TGAATATCGA GGCGATCCGC
GAGATCAAGG ATGAAGATGT GGTCGCCGGG GTACGCATTA CCGGCACGCC GCTAAAACCT
GTGGTCACCC TCTTCTCCAA TCCCGCCAAG GAGCAGGCGG AGATCCTCTC CTACATCATC
AAGGGCACAG GGCTGAATAA CTCAAGCTCA GATCAGAACA ATGCCCTGAT GATGGGCGCC
GCCCTCACCC TGGGCAATCA GCTGGGGGAT AACGCCTTTA GCAATCTTGG CAGCTCAGCC
TCCGGCATCA TAGAGAAGTT CGGCATCTCC AACGTGCAGT TCGACGCCAA CGACGAAGGC
AAGGTCGCCA TCAGTGGCTT TATCGGCGAA GATCTCATGG TCAAATATGG TGTGGGGGTG
TTCAACCCAG GCTATGAGAT GACGGTGCGC TACTACCTGA TGTCCCAGCT CTATCTGGAG
AGCGTCTCGG GCACCATCTC CAAGACCCTG GATATCTACT ACAACTTCGA TATCGATTAG
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| Protein sequence | MIERPDGIDQ GQMTQEQPLS AQGGEAPPRS LLYRLLCWLR NLVRVLLYLP LALLILLAIL
IGTPFGSRIA VNLADLLVPD LSLSYGGGTL NGQLQLEHAK WQMTGIEVET EGLSLNWRPL
CLLQRQVCVD SLGADAVRVD IDTDLLTASS PDAALKEKAA IDETSEHGPL TLPIGIILNQ
SDLNQIRVRV NEMQFNAEQL AAKASWLETG LRVNRLDSSG LLVSIPLGQS EDGTQPIQAK
NDRQDAQASW PLSQLPEVEI PMPIFVDGAH LVDSELRLGE RIDKFAAIDL AGSYLGYKIT
VDSLAFSHDY GKARLDGEMS LTQDYPMALH LEAEFNANKI SELPELKNQR LNAEINGGFS
ALAVKLKGEG HLELDLDAKG NLSTPAMPYE MTLSSRHLMW PLAQAQYEAK ALTLESSGSL
ASQSLKLTGE LKTPYHPWLS LNTQLTHQDQ NVEVAALSVD SEMGKLDLKG KLGYGEAISW
QLEADTQDLD LAQLDVMPDK PLPETQISGS LHSQGRFSDK QWSVGISQAD LQGQVDQYPL
RLQGDISLND KFQLNAEHLQ LDALESQLTL SGRVDDAWAL DGQLSVPALS LWDPSASGAI
KAVINVSGDD EHPEVAINAD TIEFKYADIT VDKAKLIAFY RPQDAHQFAL SLKSSGIKGQ
GMALSDLTLG FKGDIAKQKL GLQTYGDLQL NTSIASTFDE KTQRFDAKIK RISLNSRLGA
MALDEPFDLY WDNKHAKGEI SPFCWRHDAA SLCLTDTAEL GDKGDTRLQF AGDLGALLAP
VLPENLKWRG PTQLDGELQW AKGAKPTGQL TLAMAPGQFD LTTTKRHIEA QYHYLNLTAR
LDELQLAIDT QLESERFAKI DSQLTISTDP EHRLSGKIDL KDIDLHALAD FTPQLEVLDG
KVSSAIILGG TLNEPDLSGT VDLNDGQLAA AANPTLLDNI KLKLTLLGQT GQVKGQWTMG
DGKAKVDGVI GWQEGLKGDL NFSGDKLAII QPPLAILDVS PDLDISFSDK HLDIRGKLDV
PSGHIKIVQL PEGGVAESSD VVFNDSLASQ AQVKDPIAVT SQIAVKVGDK LTIDGMGLRG
MLVGTLELRQ AAFKPPLLYG DIKVVNGNYK FMGQTLSIKA GEVQFIGPMA VPNLNIEAIR
EIKDEDVVAG VRITGTPLKP VVTLFSNPAK EQAEILSYII KGTGLNNSSS DQNNALMMGA
ALTLGNQLGD NAFSNLGSSA SGIIEKFGIS NVQFDANDEG KVAISGFIGE DLMVKYGVGV
FNPGYEMTVR YYLMSQLYLE SVSGTISKTL DIYYNFDID
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