Gene Shew_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2168 
Symbol 
ID4923343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2521495 
End bp2521815 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content54% 
IMG OID640163753 
Producthypothetical protein 
Protein accessionYP_001094293 
Protein GI127513096 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.452703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA AAATACTCCT CCTCATGGCC GGACTTCTTC TCAGCCTCAA TGCCTTCGCC 
ATCTCGTTGC AAGACGCCAA GGCGCAAGGA TTAGTGGGCG AACAGATCAA CGGCTATCTA
GGTGTGGTGG TCAACAATAG TGAAGCCAGC GCCCTGGCCA AGTCGGTCAA CGCCAAGCGT
AAGGCGCACT ACGAAAAGAT CGCCCGCAAG AATCAGATCA GCGTAGATGA TGTGGCCAAG
CTAGCCGCCG AGAAGGCGAT AGCGGCCACC GCCAAGGGCC ATTACATTCA GACTCCCCAA
GGAAAATGGG TCAAGAAATA A
 
Protein sequence
MKSKILLLMA GLLLSLNAFA ISLQDAKAQG LVGEQINGYL GVVVNNSEAS ALAKSVNAKR 
KAHYEKIARK NQISVDDVAK LAAEKAIAAT AKGHYIQTPQ GKWVKK