| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2165 |
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| Symbol | |
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| ID | 4923340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2516172 |
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| End bp | 2517026 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163750 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001094290 |
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| Protein GI | 127513093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.6711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCTG TAACCGTAAA AAAACATCCC CAGGGACTCG AATATGTCGA GGTCGATACC
GATCTCTGTC AGGCGCGCAT CTTCATGCAA GGCGCCCAGA TAGACAGGTT TCAGCCTAAG
GGCCAAGCCC CGCTGCTCTG GGTGTCTAGC GCCGACGACT ATCAGCCGGG TAGTGGCATC
CGTGGCGGCA TCCCTGTCTG CTGGCCCTGG TTTGGCATGC ATGAGAACCC TCAGTGGCCG
CAACACGGTT TTGCCCGTAC CCGTCTATGG AATTTAGATT CGGTGCAGAT GCAGGATCAG
GTGGTGGAGC TCAAGTTTAG CCTGACGGTA AGCGATGAAG ACAAGCAGTA CTGGGCGCAT
CCGAGCAGGG TCGAGCTCAT CTTTACCTTA AGCGATAGCC TAAGCGTCAG CCTGGTCAAC
ACCAACCTTG GTAATGCGCC GTTCAATCTG ACCCAGGCGC TGCACACCTA CTTCCCTATC
GAAGATATTC ATCAGCTTAA GGCCAGCGGC TTTAGCGGCG CCCGCTATAT CGAGTTTGGC
GAAGGCCCCT TCGAGCAGGA GGGCGATGAG GTGCACTTTG ACCGGGAAAC AGACCGTGTC
TACACCCAGC TTGGCGACTG CCAGTTACTG CATACGCCAC AGGGGATCAT AGAGGTGCGC
CGCGAAAACA GCCGATCGGC GGTGCTGTGG AATCCTTGGA TAGAGAAATC TAAGCGTCTG
TCGCGCTTTA ACGATCAGGA TTATCTCACC ATGGTCTGCC TCGAGGCCGC TAATGTATTA
GAAGATAGGG TCGAGCTGGC GCCGGGTGAG TCTCATACCC TGAGCACCCA TATCCGCTGG
CAACCTCAGG GCTAA
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| Protein sequence | MGSVTVKKHP QGLEYVEVDT DLCQARIFMQ GAQIDRFQPK GQAPLLWVSS ADDYQPGSGI
RGGIPVCWPW FGMHENPQWP QHGFARTRLW NLDSVQMQDQ VVELKFSLTV SDEDKQYWAH
PSRVELIFTL SDSLSVSLVN TNLGNAPFNL TQALHTYFPI EDIHQLKASG FSGARYIEFG
EGPFEQEGDE VHFDRETDRV YTQLGDCQLL HTPQGIIEVR RENSRSAVLW NPWIEKSKRL
SRFNDQDYLT MVCLEAANVL EDRVELAPGE SHTLSTHIRW QPQG
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