| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2161 |
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| Symbol | |
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| ID | 4923333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2508721 |
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| End bp | 2510901 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163746 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_001094286 |
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| Protein GI | 127513089 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000156598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAT TGACCCTCAA GCCAATCGTG TCGGCCATGG CACTCGCCAT CGCCTTAGGC
GGCTGTAGCG CCCAGCAAGG TAGCAGCCAG CAAGCGGAAG TCGCACCCAA CGCGGTCGCG
CAGCGCATCA TAGACAACAA CGCCAGCAAC CCCTTCTTCA AGCCCTACGA TACCTTCCTG
GGTATGCCAG ATTTCGACAA GATCAAACCA GAGCACTACC TGCCGGCCTT CAAGGCGGGT
ATCGCCCAGC ACAAGGCTGA GATCCAGGCC ATTATCGATA ACCCGGCGGC CCCTACTTTC
GCCAATACCA TCGAAGCCAT GGAATTTGCC GGCGATCTCA CCACTAAGGT GGCCAGCGTC
TTCTATAACC TGACCAGTGC CGACACCAAC GAGCAGCTAC AGGCGATCTC TAAAGAGGTC
TCTCCTATGT TGTCTGCCGC CGGTGATGAC ATCCTGCTTA ACGACCAGCT GTTCAAGCGC
GTCAAAGCCG TATATGACCA GCGCGATAGC CTGGCGCTTA ATACCGCCCA GCAGAAGCTA
CTGGAAGATA CCTACAAGTC ATTCACCCGC GGCGGCGCTA ACCTGAGCGA TGCCGACAAG
GTTAAACTCA GAGCCCTGAA CGAGAAGATC GGCAAGCTGA GCCTGGAATT TGGCGATAAC
CTACTGGCCG AAACCAACGC CTTCGAGCTA GTAATAGACA ACGCCGCCGA TCTCAAAGGT
CTGCCGCAGG ATGTGATCAA CACCGCCGCG CAAACCGCCG AGAAGAAGGG TCATCCGGGC
AAATGGGTAT TCACCACCCA GCGTCCATCT ATCACCCCTT TCCTCACCTA CGCCGACAAC
CGCGAGCTGC GTGAGAAGAT CTACAAGGGT TACGTTGAGC GTGGCAACAA TAACAACGCC
CACGACAACA AGAAGATCCT GGCTCAGATG GCGGCCCTGC GCGCAGAGCG CGCCCAGTTA
ATGGGTTATA AGAGTCACGC TCACTTCGTG CTGGAAGAGC GCACCGCCAA GACCCCTGAA
AATGTCTATG GTCTATTAGA TAAGGTCTGG CCGGCAGCCC TTGGTCAAGC CAAGGCAGAA
GTCGCCGTGA TGCAGGAGCT GATCGACGCC GAAGGCGGTA ACTTCAAGCT GGCGGCCTGG
GACTGGTGGT ACTATGCCGA TAAGATCCGT GTGGCCAAGT ACAGCTTCAA CGAGCAGGAA
ACTCGCCCAT ACTTCTCACT GGAAAACACC CTGAAAGGCG TGTTCTACAC CGCCAACCGT
CTCTACGGCA TCACAGTTAA AGAGCGCACC GACCTGCCTA AGTACAACGA CGAGGTGCGT
ACCTGGGAAG TGTATGACAA AGATGGCTCG CTGATGGCGA TCTTCCTGGG TGACTACTAT
GTTCGCGACA GCAAACGTGG TGGTGCCTGG GCCAACGCCT ATCGCAAGCA GTACAGAATG
CATGGGGTCG AGTCTAAGCC GATTATCGTC AACGTGCTCA ACTACCCACG TCCAGTCGGC
GACGAGCCGG CGCTGCTCAC CTTCGATGAG GCCAGCACTC TGTTCCACGA GTTTGGTCAT
GCCTTGCACG CCATGCTGTC GGACGTCGAA TACCGTTCAC AGGCCGGCAC CTCGGTACCA
CGTGACTATG TAGAGTTCCC ATCACAGGTG ATGGAAAACT GGATGACCCA ACCAGAAGTA
CTGGCGCAGT TTGCCAAACA CTACAAGACG GGCGAAGTGA TCCCTCAGTC GCTGGTTGAG
AAGATCCAAG CGGCCAGCAA GTTCAACCAG GGCTTTGCCA CGGTTGAATA TATGGCGGCC
ACCAAGCTGG ATCTCGACTG GCACACCCTG AGCGACTTCG AGCCTAAGGA TGCGGCCAAG
TTTGAAGCCG ACTCGCTGAG CAAGATGGGC CTGATTGAGG AGATCGCGCC GCGCTATCGC
AGCACCTACT TCTCACACAT CTTCTCGGGT GGTTACTCGG CCGGTTACTA CAGCTACCTA
TGGTCTGACA TCCTGGGCGC CGATGCCTTC GAGGCCTTCA AAGAGAACGG TATCTTCGAC
AAGGCAACCG CCGACGCCTT CAGAAACAAC GTGCTGTCTC AAGGCGGCAG CGAAGATCCT
ATGCTGCTCT ACAAGCAGTT CCGCGGTAAG GAAGCGGGCA TCGAGCCGCT GCTTCGCAGT
CGTGGCCTGC TCGCCAAGTA A
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| Protein sequence | MKGLTLKPIV SAMALAIALG GCSAQQGSSQ QAEVAPNAVA QRIIDNNASN PFFKPYDTFL
GMPDFDKIKP EHYLPAFKAG IAQHKAEIQA IIDNPAAPTF ANTIEAMEFA GDLTTKVASV
FYNLTSADTN EQLQAISKEV SPMLSAAGDD ILLNDQLFKR VKAVYDQRDS LALNTAQQKL
LEDTYKSFTR GGANLSDADK VKLRALNEKI GKLSLEFGDN LLAETNAFEL VIDNAADLKG
LPQDVINTAA QTAEKKGHPG KWVFTTQRPS ITPFLTYADN RELREKIYKG YVERGNNNNA
HDNKKILAQM AALRAERAQL MGYKSHAHFV LEERTAKTPE NVYGLLDKVW PAALGQAKAE
VAVMQELIDA EGGNFKLAAW DWWYYADKIR VAKYSFNEQE TRPYFSLENT LKGVFYTANR
LYGITVKERT DLPKYNDEVR TWEVYDKDGS LMAIFLGDYY VRDSKRGGAW ANAYRKQYRM
HGVESKPIIV NVLNYPRPVG DEPALLTFDE ASTLFHEFGH ALHAMLSDVE YRSQAGTSVP
RDYVEFPSQV MENWMTQPEV LAQFAKHYKT GEVIPQSLVE KIQAASKFNQ GFATVEYMAA
TKLDLDWHTL SDFEPKDAAK FEADSLSKMG LIEEIAPRYR STYFSHIFSG GYSAGYYSYL
WSDILGADAF EAFKENGIFD KATADAFRNN VLSQGGSEDP MLLYKQFRGK EAGIEPLLRS
RGLLAK
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