| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2156 |
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| Symbol | |
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| ID | 4923328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2501071 |
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| End bp | 2501688 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163741 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001094281 |
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| Protein GI | 127513084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.823885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC ATATTCTTAT TGCCGTTTTT CTGCCCACCT TCTTCTTCGT CTCCATCACA
CCCGGGATGT GTATGACACT GGCGATGACC CTCGGCATGA GCATAGGGGT GCGCCGCACC
TTGTGGATGA TGATAGGCGA GCTGGCCGGA GTGGCCCTGG TGGCGGTTGC CGCCGTGATG
GGAGTCGCCG CCATGATGCT AAATTATCCG CAGATCTTCG AGGTGCTCAA ATGGGTCGGC
GGCGCCTATC TTGGCTATAT CGGCATACAG ATGTGGCGCG CCAAGGGCAA GATGGCGAGC
CTGGACAATC AGAGCACGCA GATCAGCAAC CAGGCCTTGA TCTCACAGGG CTTTGTCACC
GCCATCGCTA ACCCCAAGGG CTGGGCCTTT ATGATCTCTC TGCTGCCGCC TTTCATCGAT
GTGGAGCGCG CGGTGGCGCC GCAGCTGAGC CTGCTACTGA TGATCATCAT GATGACAGAG
TTTGTCAGCA TGCTGGCCTA CGCTAGCGGC GGCAAGTCGC TCAAGTTGTT TTTGGCGAAG
GGCGATAACA TCAAGTGGCT CAATCGCATC GCGGGTTCCT TGATGATAGG GGTCGGCTTC
TGGCTGGCAT TGGGCTAA
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| Protein sequence | MSDHILIAVF LPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMIGELAG VALVAVAAVM
GVAAMMLNYP QIFEVLKWVG GAYLGYIGIQ MWRAKGKMAS LDNQSTQISN QALISQGFVT
AIANPKGWAF MISLLPPFID VERAVAPQLS LLLMIIMMTE FVSMLAYASG GKSLKLFLAK
GDNIKWLNRI AGSLMIGVGF WLALG
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