Gene Shew_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2152 
Symbol 
ID4923324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2497142 
End bp2497486 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content51% 
IMG OID640163737 
Producthypothetical protein 
Protein accessionYP_001094277 
Protein GI127513080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.589145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT ACACCACAGG CGTTAGCCTT ATCCTACTGG GACTGTCTAT CGGTTTTTCG 
CCGCTAACCC TGGCTAAAAA CGATAAGCAT GAACATGGTG CCAAGGCCCA TAACGAAAAG
AGCCTGCCAC CAGGATTGCA GAAGAAGGTG GCCCGCGGCG AGCCGCTACC ACCGGGCTGG
CAGAAGAAAC TGCACAAGGG CGATTACCTG TCTGATGACT ATTATGATCG CGGCAAGATC
CATGTGCCTA TCGACCGTGA CGGCAACATC ACCATAGATG TCGATGGCAC CTTTATTAAG
CTGCACGACA AGACACGTCG TATCCTCGAT ATTATTAACG ACTAG
 
Protein sequence
MKKYTTGVSL ILLGLSIGFS PLTLAKNDKH EHGAKAHNEK SLPPGLQKKV ARGEPLPPGW 
QKKLHKGDYL SDDYYDRGKI HVPIDRDGNI TIDVDGTFIK LHDKTRRILD IIND