| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2143 |
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| Symbol | |
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| ID | 4923363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2489193 |
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| End bp | 2489876 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163728 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094268 |
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| Protein GI | 127513071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000288858 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCTGCAA GCCTGCCCCT GGTCGACATC CCCTTCGACA GACGCCACAC CTGTTGGTTC
TGCGCCGAGC CCTGTGCTCA TCAGTTTGAC TATCACGCCT TGGGACATTG CCCTCACCCC
TCGCTAGCGG TTCCCGCCTG TAAGGAGTGT CTGCAGATCG CCGAGAAGGC ACCGCTTAGC
TCTATCTGGG ACTGCCACAG CGCAGTTAAA GACGAGTTAA TGCGCCGCTA TGCCAAACAC
CTGGCCATAG GCGAAAACTG GACCCAAGAG GAGCTAGAAG AATCGGACTT TAGCTGTAAG
GTATTCGAAG GCTTTAAGAA GAGCGCCTGG TTTATGTATC AGGTCGCCAA AGAACGGGTC
AGCGTTGCGC CCTGGCCCCT CAGCCTCAAG GGGATCCCAC TCGACACAGC TGGTTTTGGC
GGCGGTTTTG AGTTTGACGG CGTGCAATTT TCGTCGCTGG CCAAGGCCGT GGAACATTAC
GCCAAGATGC TGGGACTGGA TAAGGCCTTT CTGCATCAGC TGCTGGCCGC CGTTGGCCGT
GACCGTTTCG GCTACGCGGT GCGCATCGCC AGGATCAATA TCGTCTCCAC CGCCGTGGTC
AAGCGTCAAG TATTGCGAGA TATCCTTGCC GAGCAGGCAC TCGACTATGA TTCTATAGGC
AATGATTCGC TAGACGATGA ATAG
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| Protein sequence | MSASLPLVDI PFDRRHTCWF CAEPCAHQFD YHALGHCPHP SLAVPACKEC LQIAEKAPLS
SIWDCHSAVK DELMRRYAKH LAIGENWTQE ELEESDFSCK VFEGFKKSAW FMYQVAKERV
SVAPWPLSLK GIPLDTAGFG GGFEFDGVQF SSLAKAVEHY AKMLGLDKAF LHQLLAAVGR
DRFGYAVRIA RINIVSTAVV KRQVLRDILA EQALDYDSIG NDSLDDE
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