| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2140 |
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| Symbol | |
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| ID | 4923360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2486164 |
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| End bp | 2487036 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163725 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094265 |
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| Protein GI | 127513068 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000023466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA TGGAGAGTTT GTCATTTGCC CAGCGGCAAC GTCTGGCGTT TATCGACTTT
AGTTTGCAGT ATTTTGGCCA GGTATCACGC CAGGACTTGA TCGCCAAATT CGCCACAGGC
CTGGCGGCGG CGACAAGGGA TTTCTCCAGC TACCGCGAGT TGGCGCCCCA CAACATGGAG
CTGGTGCATC AGACCAAGCG TTACCATAGG CGCGCCGAGT TTACCCCGCT GTTTGACCAT
GATCCCGAGG CGATCCTCCA CGGGTTGGCC AATGGTTTCG GCGACGGGCT ATCCCATCCG
GTGACGCCAA GTAGCGTCTG TCTGGATGCG GTGCAGCTTA TTCATCCCGA TACCAATATT
ATTGCCGCCG TGATGCGGGC TATCGCCCAT AAGCAGGCGA TAGCCGTGAC TTATGTGTCC
GTGTCATCGG GGGAAACTCA CAGAGAGCTG GTGCCGCACA CCCTGGTGAA TAATGGACAG
CGCTGGCATG TACGCTGTTT CGATCGCACC CATCAGGTGT TTACCGACTT TGTGGTGACC
CGCTTCAAGG CGGTGACTCA GAGCGCCACC GAACCCTTCG ACCATGAGCT GCAAGAAAAG
GATGGCTACT GGCAGAAGTT GGTCTCTCTG GTGTTGATCC CCCATCCCAG CCTGATGCAT
CCCGAGGCGA TTGCGCTGGA CTATCAGATG AGCGAGGGGG AATTGGTAAT TAGTTGCCGT
GCCGCTCTGG CAGGTTATCT GCTGCGCCAG TGGAGCGTAG ACTGCTCGGC TCAGCATCAG
ATCCGCAGCG GCGTCTGTCA GCTCGCCCTT AAGAATCACG CCATCTTAAG CGAGATAGAG
CATCTGGCTA TAGTGCCGGG CGCCAAGGCA TAA
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| Protein sequence | MDAMESLSFA QRQRLAFIDF SLQYFGQVSR QDLIAKFATG LAAATRDFSS YRELAPHNME
LVHQTKRYHR RAEFTPLFDH DPEAILHGLA NGFGDGLSHP VTPSSVCLDA VQLIHPDTNI
IAAVMRAIAH KQAIAVTYVS VSSGETHREL VPHTLVNNGQ RWHVRCFDRT HQVFTDFVVT
RFKAVTQSAT EPFDHELQEK DGYWQKLVSL VLIPHPSLMH PEAIALDYQM SEGELVISCR
AALAGYLLRQ WSVDCSAQHQ IRSGVCQLAL KNHAILSEIE HLAIVPGAKA
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