| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2135 |
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| Symbol | ushA |
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| ID | 4923355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2481047 |
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| End bp | 2482750 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163720 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001094260 |
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| Protein GI | 127513063 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000035246 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA AGCTTTTAAA AGGATTAGTC GCTACCGCTG TATTGGCAGC ACTTGCTGGT
TGTAACAGCA GCGATGACGA CAAGGCGCCA ACAACATGTG CTGAAGCTGG CACTGCTTGC
ACCAAATTTA CCGTACTGCA CACCAATGAT AACCATGGTC GTTTCTGGGA AAACAAAGAC
GGCGAATATG GTATGGCGGC ACGTAAGACG CTGATCGAAA AGATCCGCGC CGAAGTGGCG
GCCAATGGCG GCGAAACGCT GCTGCTTTCT GGTGGTGATA TCAACACAGG TGTACCTGAG
TCTGATCTGC AAGACGCACT GCCAGATTTC CTTGGTATGA ACGATATCGG TTATGACGCT
ATGGCGGTCG GTAACCACGA ATTTGATAAC CCATTGGCGG TACTGGATTC GCAGCGTTCT
ATCGCTAACT TCCCAATGCT GGCGGCTAAC ATCTACAAAG AAGATGGCAC TCGCTACTTC
GAAGCCTACA AGGTATTCGA TGTTAACGGC ATCAAGATTG CTGTTATCGG TCTAACCACC
GAAGACACGG CTAAACTGGG TAACCCAGAA TTTATCTCAG GTCTTAAGTT CACCGATCCT
AAAGAAGAGA TCGTTAAGGT GATCAAAGAG ATCAAAGACG CTAAGGCAGC CGATCTTATC
TTCGCAACGA CTCACATGGG TCACTATGCG AACGGCGAAC ACGGCAGCAA CGCCCCTGGC
GACGTGGCTC TGGCCAAGGC GCTTGAGCAA GGCCAACTTC AGGCTGTGAT CGGTGGTCAC
TCACAAAACC CAGTTTGTAT GGAAGGCGGC GAGTATGCTG ACTTTGCACC GGGCGACGAG
TGTACACCTG ATCAGCAAAA CGGTACCTAC ATCATGCAAG CTCACGAGTG GGGTAAGTAT
GTTGGCCGTG CCGATTTCGA ATACTTCAAC GGTGAACTGC ACCTGGCTAA CTACAAGCTG
GTTCCAGTTA ACCTAGTGAA GAAAGTAAAA GATGAACAAG GTAACGAGAC TAAAGTACTG
GTAGGTGAAG CGATCGAGGC CGATGCTGCA CTGAAAGAGA TGCTTTCTTA CTACCAAGAG
CGTGGTCAAG GCCAACTGGA TGAAGTGATA GCTTCTACCG ATGGCTTACT AGACGGTGAG
CGTGCAAACG TACGTTACAT GCAGACTAAC CTGGGTCGTC TGATCGCCGA TGCACAGCGT
ACCAAGGTTG CGGCCGATGT GGGCGTGATG AACTCTGGTG GTGTTCGTGC GTCAATCGAA
GCCGGTGACA TCTCTTACCG CGACGTACTG ACAGTTCAGC CTTTCGGTAA CATGGTGACT
CTAAGCACTA TGACAGGTGA AGAGCTTAGC GCTTACCTGG GTGAAGTGGC TAGCCTACAA
ATTGGTGCAG GTGCTTACGC TCAGATCACT GGTGTTAAGA TGACGGTTGA CTGTGCGGCT
AAGACAGTGG CTATCAGCGA AGTTAACGGT AAAGAGTACA GCGCGACTGG CTCTTACACC
ATGACAGTAC CTAGCTACAA CGCGGCAGGT GGTGACGGCT ATCCTAAGCT AAACCCAGTA
CAAACAGGTT ATGTTGACGC CGAAGTACTG TACACCTTCT TCAAGGATGC AGGCACTATC
GTAGCGGCCG ACTACAACCC AGTAGGCGAT ATCGTTTACG AAAACTCTGA AAGTGTTGAA
GGTTGTCAGA TCACTGCTCA ATAA
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| Protein sequence | MTNKLLKGLV ATAVLAALAG CNSSDDDKAP TTCAEAGTAC TKFTVLHTND NHGRFWENKD
GEYGMAARKT LIEKIRAEVA ANGGETLLLS GGDINTGVPE SDLQDALPDF LGMNDIGYDA
MAVGNHEFDN PLAVLDSQRS IANFPMLAAN IYKEDGTRYF EAYKVFDVNG IKIAVIGLTT
EDTAKLGNPE FISGLKFTDP KEEIVKVIKE IKDAKAADLI FATTHMGHYA NGEHGSNAPG
DVALAKALEQ GQLQAVIGGH SQNPVCMEGG EYADFAPGDE CTPDQQNGTY IMQAHEWGKY
VGRADFEYFN GELHLANYKL VPVNLVKKVK DEQGNETKVL VGEAIEADAA LKEMLSYYQE
RGQGQLDEVI ASTDGLLDGE RANVRYMQTN LGRLIADAQR TKVAADVGVM NSGGVRASIE
AGDISYRDVL TVQPFGNMVT LSTMTGEELS AYLGEVASLQ IGAGAYAQIT GVKMTVDCAA
KTVAISEVNG KEYSATGSYT MTVPSYNAAG GDGYPKLNPV QTGYVDAEVL YTFFKDAGTI
VAADYNPVGD IVYENSESVE GCQITAQ
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