| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2120 |
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| Symbol | |
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| ID | 4923486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2456566 |
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| End bp | 2457546 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163705 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094245 |
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| Protein GI | 127513048 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA AGGGAATAGT GCTTCTGGTC TTAGTCGTTA TGGGGCTCTT ATCGATCAAC
TGGTGGGGTG GCAAGGCGCC CGCTACCGAG CCACCCATTA AGTTAAAAAT AGCAACCTCT
ACCACGCCAC TGAGTGCCCC GCTGATCATC GCCAGGGAGC TTGAGCTGTT TAAGCCCTAT
AACCTGGATA TCGAACTTAT CCCGCTGCGC GGTGGTCACC TCTGTTTTCA GGCAATGATA
CAGGGCGTTG CGGATCTGGC GACCAGCTCG GAAACCGTGA TAATGTTCAA CGGCTTTCAG
CGTAGCGACT TTCGATTGCT GGCAAGTTTT GTCGAGTCGG ATAACGATCT CAAGCTACTC
ACCCTCAACG ATGAACAACC CAAGAGCATC ACCCAGCTAA GCGATAAGAA GATAGGCATG
GTCAAAGCCA GCTCCAGCGA GTTCTTTGCC GATGCGTTCC TGATCATCAG TGGTCATCAA
CAGCAGGATT TTCAGAAGGT ATTCATGTCC CCCCAGGCGT TAGGGCCAGC GTTGCTGGCC
GGTGACGTCG ACGCCATCTC GGTATGGGAA CCCTTCGGCT ATAAGCTGAT CGAAGAGCAT
GGCGATACCA TCTATCAATA CCCGGGTAAA GGGATCTACA ACCTCTCCTT CAACCTGGTT
ACCTCGGCGG TCAACGCCAG GCTGCATGAG AAGCAGCATG CCGATATTCT GCGGGCGTTA
AAGAGTGCAC AAAACTTTAT TAATCAGCAC CCTCAAAGTG CCAAGCAGAT CATCAGCGAC
TATCTAGATA TCTCCTTGTC CGAACTGGAG TGGGCGTGGA ATGATTACGT ATTTCGGCTA
TCTTTAAATA ACTCACTGAT CTCAAATTTA CATGCGCAGG CGCGCTGGGC CATTGCCAGC
GGCGCCGTCG ATGCACAGAC CACCCCGGAT TTTAGGCTGC TTCTGGATGA TTCAGCACTC
AAGCAGGCGC TCGATAACTA G
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| Protein sequence | MKAKGIVLLV LVVMGLLSIN WWGGKAPATE PPIKLKIATS TTPLSAPLII ARELELFKPY
NLDIELIPLR GGHLCFQAMI QGVADLATSS ETVIMFNGFQ RSDFRLLASF VESDNDLKLL
TLNDEQPKSI TQLSDKKIGM VKASSSEFFA DAFLIISGHQ QQDFQKVFMS PQALGPALLA
GDVDAISVWE PFGYKLIEEH GDTIYQYPGK GIYNLSFNLV TSAVNARLHE KQHADILRAL
KSAQNFINQH PQSAKQIISD YLDISLSELE WAWNDYVFRL SLNNSLISNL HAQARWAIAS
GAVDAQTTPD FRLLLDDSAL KQALDN
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