| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2112 |
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| Symbol | rnhA |
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| ID | 4923596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2447746 |
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| End bp | 2448222 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163697 |
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| Product | ribonuclease H |
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| Protein accession | YP_001094237 |
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| Protein GI | 127513040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0006502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGAC TGAAACAACT CTTAATCTTT ACCGATGGTT CTTGCCTGGG CAATCCGGGT
CCCGGCGGCT ATGGCGTGGT GATGAAATAT AAGGCCCACG TGAAGGAACT CAGCGGCGGT
TTTGCCTTAA CCACCAACAA CCGCATGGAG CTCCTGGCCC CGATCATGGC GCTGGAGGCG
CTCAAGGAGC CCTGTCAGAT CATTCTCACC AGCGACAGCC AATATATGCG CCAGGGGATC
ACCCAGTGGA TCCATGGCTG GAAGAAGCGC GGTTGGCTCA CCGCCGCTAA GGAACCTGTT
AAGAATGTCG ACCTCTGGCA GCGCCTGGAT GCCGCCACCA GTACACATAA GATAGACTGG
CGCTGGGTAA AGGGCCACGC GGGTCATATC GAAAATGAGC GCTGCGATAC CCTGGCGCGA
GAAGCCGCCG AGGCTGGCCC GAGTGAGGTA GATACAGGCT ATCAGGCAAA AGGCTAG
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| Protein sequence | MHGLKQLLIF TDGSCLGNPG PGGYGVVMKY KAHVKELSGG FALTTNNRME LLAPIMALEA
LKEPCQIILT SDSQYMRQGI TQWIHGWKKR GWLTAAKEPV KNVDLWQRLD AATSTHKIDW
RWVKGHAGHI ENERCDTLAR EAAEAGPSEV DTGYQAKG
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