Gene Shew_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2105 
Symbol 
ID4923589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2437406 
End bp2437756 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content54% 
IMG OID640163687 
Productmethylated-DNA-(protein)-cysteine S-methyltransferase 
Protein accessionYP_001094230 
Protein GI127513033 
COG category[L] Replication, recombination and repair 
COG ID[COG3695] Predicted methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0385161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGA CACAGTTATC ACCCATGGCC AAGATATGGC ATGTGATTGC CCTGATCCCC 
GAGGGGAAGG TCAGCTCCTA TGGCAAGATA GCCGATCTCG CGGGGCTGCC CGGACGGGCA
CGCTACGTCT CCCGCGCCCT CAAGATGGCG CCCGATACAT TGGAGCTTCC CTGGCATAGG
GTGATCAACA GCCAAGGCAA AATAGCCTTT CCCGAGACCA GTCCCTATTT TATCGAGCAG
ATGCAGAGAT TAAGAAGTGA AGCGATAGAA GTGAACCGAG GTAGGGTTAA GCTGTCCAAG
TATGAGTGGC AGCCGGATCT GGCGACCCTA GTGTTTGCAT TACCCTTTTA A
 
Protein sequence
MDQTQLSPMA KIWHVIALIP EGKVSSYGKI ADLAGLPGRA RYVSRALKMA PDTLELPWHR 
VINSQGKIAF PETSPYFIEQ MQRLRSEAIE VNRGRVKLSK YEWQPDLATL VFALPF