Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2089 |
Symbol | |
ID | 4923625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2416453 |
End bp | 2417850 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640163671 |
Product | SrpA-related protein |
Protein accession | YP_001094214 |
Protein GI | 127513017 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.885668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGGCG CCATGACTAC GCCCCCCTTA ACGGCGATGC GCCTCGGTGC ATTGCCGTCT TCTTCTGCTT CAACTTCTTC AATTTCCTCA TCTTCTACAG CTTCTTTATC TTCTTCAAAT AGGGCTTCAA GTTCCCAAAG TACCGCTTCA AGTTCCATAA GCACTGCTTC AACGCCAGCA GCCTCTCATC AAACGTCACA TGCCAGCCTG AAGGCCAACA CGGCGGTATC CTCGACGCCT TCGGGTGCAA CCAGTCTACT TACCTCTGGT AACTTAAGTT CTGGCTTGTC AACACAAAGG GGGTCAAGTG CGAGCCGTCC TGTCTTCAAT GGCAGTTCGT CAGGTCAAGG GGGATATAGC CTTTCCAGCG GGCCTCTCGG AGTTGGAGGC CTACTCAATC AAACGGCAAG CTCTGGTTTT AGCAGTGGCT TGAGCAAAGG CATGGGCAAT GGCGGTGGGG TGGACGGCGC TTCGACACTT CCGGATGCGG CAGGTAGAGT AGCAGGCTCA GGTTTACCCC CTGGTTCGCG AGGTAGCAAT GGCAAACCAA ATGCGAGTAC AGCAGGGGGA CAAGGCGGTG TTGACGTTAG TCGCGGCAGC GCAATTGAGG GGGAAAAGCC GGTAGTCGAT ATCTTTGGTG GGGCCGAGGA AACCCGCGGC GAGGCATACA ACCCCTTCGC GGATAAGCAA GAGGGAAAGG ACGCACCAAG TGATGAGAGC CGCTCACAAG CCCCTGAACT TGCCCGCCAG GAAGCTGAGC TGAAAGAGCT GTCCAGACGT GACGCCGAGG TGAGGGCCCA TGAGCAGGCT CACGCCAGCG TTGGCGGTAC CTTCGCGCGT AGCCCAAGTT TTAAGTATGA ACAGGGGAGC GATGGCAGAC GATATGCGGT TGATGGCGAG GTGGCGATCG ATATCTCCTC CGTGCCTGGG GATCCCCTGG CTACCCTGAA CAAGATGAAG CAGGTCTACG CGGCGGCGAT GGCCCCTGCG ACCCCATCGA TGGCAGATAT CCGGGTGGCC AGCGAAGCCC TGCGTAAGAT GAATTCGGCA AAGGCCGAGC TTGCCAAAAC GCGTCAGCAA AGCGCCATCA CCCCTGAGCA GATGAAGCCG CTTATCGATG CCGGTAAGAG TGAGCAGCAG CGCCAGCTGC CAGAGCCAGT GACGCCAAAG GTGAGCGGTA GTGTGGATGA TCAGGGCAAG ATCTCTGCGG CCAGAATCGA TTCCCCCTCG CCGCTAGATG ATGATAGAAG CCCTTCACAA TCGATAGAGC GGATCAGTCG CCAGCTTCTG GCGGCCGATG GTCTTCTGTT TAGCGCTGAA GCCCTGTCGA TGCGCTACCA AGCGGGCGAG TCTGACGCTT CTTCAACATC TTCCTCATCC TTCGCCTTCT CCCTCTAA
|
Protein sequence | MAGAMTTPPL TAMRLGALPS SSASTSSISS SSTASLSSSN RASSSQSTAS SSISTASTPA ASHQTSHASL KANTAVSSTP SGATSLLTSG NLSSGLSTQR GSSASRPVFN GSSSGQGGYS LSSGPLGVGG LLNQTASSGF SSGLSKGMGN GGGVDGASTL PDAAGRVAGS GLPPGSRGSN GKPNASTAGG QGGVDVSRGS AIEGEKPVVD IFGGAEETRG EAYNPFADKQ EGKDAPSDES RSQAPELARQ EAELKELSRR DAEVRAHEQA HASVGGTFAR SPSFKYEQGS DGRRYAVDGE VAIDISSVPG DPLATLNKMK QVYAAAMAPA TPSMADIRVA SEALRKMNSA KAELAKTRQQ SAITPEQMKP LIDAGKSEQQ RQLPEPVTPK VSGSVDDQGK ISAARIDSPS PLDDDRSPSQ SIERISRQLL AADGLLFSAE ALSMRYQAGE SDASSTSSSS FAFSL
|
| |