| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2084 |
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| Symbol | |
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| ID | 4923620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2410221 |
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| End bp | 2411726 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163666 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_001094209 |
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| Protein GI | 127513012 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0826807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCTA AAAAACCTTT TTATATCTTA GTGGCCCTGC TGTTTATCGC AGGCATTGCC
GCCAGCGTCT ATCGCGGCAT AGAACACAAT GTCCCCTTCC TCCCAGGCGA GCAGGTACAG
AGCTGGGCCG TGGATGCCAA GGTGAGCTTC CAGGGCACAG GCGAGCCTGC CGAGGTGACC
TTCTCGCTGC CCAAGGATCC TGCCTTTGAG ATCTTAGCGG AAAACGCGAC CTCTCCAGGC
TACGGCTTGT CAGCCACAGA GGATGACACA GGCCGTCAGG TCACCTGGTC GACCCGCGAG
GCGATCGGTC AGCAAGATCT CTACTATAAG GTCACCCTGG TACCGACCGG CAAGAATGAG
ATCCCGGCAG ACAAAGAACC CGACGCGCCG CAGGCCTACA ACTGGCCCGC CACAGAGAAG
GCCGCCGCCG AGCAAGTGAT GAGCGAGATC TGGTCGCGCA GCGCCACTAA CCTGTCGTTT
GCTCAGCAGC TTAACAAGAG CTTCAATGCT ACAGAGCGTA GCCAGAACCT TGAGCTACTG
CTGACCAGTA ACTCCCGCGC CGAGCTGTTT ATCCACATGC TCAACAGCAA GGGGATCCCG
GCGAAGAAAG TCAGCGGTCT GTTTTTAGAA GATCAACGTC GTCGTCAGCA GCTGACCAAC
TATGTTGAGG TCTATCATCA GGGTCAGTGG ATCATCTTCA ATCCCAACGA TGGTACCCAA
GGACGCCCTG ACAACCTGCT TATCTGGGAC AGAACCGCCA AGTCGACTCT GGACGTAGTA
GGCGGCGTTA ACTCTCAGGT TAACTTCTCC ATGTTGCAAG ACACCCGCTC GGCGCTCGCC
ACCTCTATCG ACATGCTGAA GAATAAGAAT GCCTTGGACT TCTCCCTCTA TCAGCTGCCG
CTGGAAGAGC AGAGCCTGTT TAAGGGTATA TTGCTGATCC CTATCGGCGT GCTTATGGTG
GTGTTCCTGA GGGTGATTAT CGGTATCAAG ACCTCGGGTA CCTTCATGCC CGTGCTGATC
GCCCTGGCCT TTATTCAAAC CACACTGCTG ACCGGCCTTG TCGGCTTCCT GCTGATCGTC
GCCTTCGGCC TGATGATCCG CTCCTATCTG TCGGATCTCA ACCTCTTGCT GATCTCACGG
ATCTCCGCGG TGATCATTGT GGTGATCGGC ATCATAGGCC TGTTTACCCT GCTCTCTTAT
AAGTTCGGTT TGAGCGAGGG GCTCACCATC ACCTTCTTCC CGATGATCAT CCTGGCATGG
ACCATCGAGC GTATGTCGAT TCTCTGGGAA GAGGAAGGCG CCAAAGAGGT AATGGTTCAG
GGCGGCGGCA GCCTGTTTGT TGCTACCTTA GCCTACCTGG CCATGAGCGC TACCTGGGTA
CAACACTGGG TATTTAACTT CCTGGGTATC CACTTGGTGA TCCTGGCAAC TGTGCTCCTG
ATGGGCCAAT ACACAGGTTA TAAGTTATTG GAACTTAGAC GCTTTAGACC TTTAGCGGGA
GAATAA
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| Protein sequence | MHSKKPFYIL VALLFIAGIA ASVYRGIEHN VPFLPGEQVQ SWAVDAKVSF QGTGEPAEVT
FSLPKDPAFE ILAENATSPG YGLSATEDDT GRQVTWSTRE AIGQQDLYYK VTLVPTGKNE
IPADKEPDAP QAYNWPATEK AAAEQVMSEI WSRSATNLSF AQQLNKSFNA TERSQNLELL
LTSNSRAELF IHMLNSKGIP AKKVSGLFLE DQRRRQQLTN YVEVYHQGQW IIFNPNDGTQ
GRPDNLLIWD RTAKSTLDVV GGVNSQVNFS MLQDTRSALA TSIDMLKNKN ALDFSLYQLP
LEEQSLFKGI LLIPIGVLMV VFLRVIIGIK TSGTFMPVLI ALAFIQTTLL TGLVGFLLIV
AFGLMIRSYL SDLNLLLISR ISAVIIVVIG IIGLFTLLSY KFGLSEGLTI TFFPMIILAW
TIERMSILWE EEGAKEVMVQ GGGSLFVATL AYLAMSATWV QHWVFNFLGI HLVILATVLL
MGQYTGYKLL ELRRFRPLAG E
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