| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2082 |
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| Symbol | |
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| ID | 4923618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2408450 |
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| End bp | 2409442 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163664 |
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| Product | putative methyltransferase |
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| Protein accession | YP_001094207 |
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| Protein GI | 127513010 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0434288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGCT TCAGCTCCTT TTATCAACAA ATTGCCGACT CCAATCTTCA ACATTGGTTA
GAAGAGCTGC CGGCCATCCT CGGCCAGTGG CAACGTGAAC ATAAGCATGG CAACCTACCC
AAGTGGGAGA AGGTGCTCAA TAAGTTGCAC TATCCTGCGC CGGACAGAAT CGATTTCACC
ACTAGGGTAG AGGTGGGCAG CGGCGATCAG CTCAGCAAGG GACAGCAGGA AAAACTCAAG
AACCTGCTTA AACTCTTCTG CCCCTGGCGC AAGGGCCCCT TCGATCTGCA TGGCATCCAT
ATCGACACCG AGTGGCGCTC AGATTGGAAG TGGGAGCGAG TTCAGCCCCA TATCTCACCA
CTGAAGAATC GCACCGTACT CGATGTCGGC TGTGGCAGCG GCTATCACAT GTGGCGTATG
CTGGGTGACG GCGCTAAACG CGTCGTGGGT ATCGACCCCT CGCCGCTGTT TCTGTGTCAA
TTTGAGGCGG TAAAACGCCT AGCGGGCAAT GATCACCCAG TGCACCTGCT GCCTCTGGGC
ATAGAGCAGC TGCCGCCGTT GGATGCCTTC GACACCGTCT TCTCCATGGG CGTGCTCTAT
CACAGACGCT CCCCCATAGA TCACCTGCTG CAACTGAGGG ATCAACTGAG AACCGGCGGT
GAACTCGTGC TCGAGACCTT AGTGGTCGAT GGCGATGAAA ATACCGTACT GGTCCCAGGG
GAGCGCTACG GCAAGATGAA CAACGTCTGG TTCCTGCCGT CGGCCAAGGC GCTGGAAGCC
TGGCTAAAGA AGGCGGATTT TGTCGATGTA CGCTGCGTCG ATATCGATGT GACTTCACTT
GCAGAACAGC GCAGCACAGA ATGGATGCCT AATGAGTCCT TGGTGGACTA CCTGGATCCT
AACGATGTCA GCCTGACGGT TGAGGGGTAT CCGGCGCCCA AACGCGCCAC TTTTATCGCC
GTTAAGAATC AACCCAACAA AGATTTGGTT TAA
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| Protein sequence | MISFSSFYQQ IADSNLQHWL EELPAILGQW QREHKHGNLP KWEKVLNKLH YPAPDRIDFT
TRVEVGSGDQ LSKGQQEKLK NLLKLFCPWR KGPFDLHGIH IDTEWRSDWK WERVQPHISP
LKNRTVLDVG CGSGYHMWRM LGDGAKRVVG IDPSPLFLCQ FEAVKRLAGN DHPVHLLPLG
IEQLPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRTGG ELVLETLVVD GDENTVLVPG
ERYGKMNNVW FLPSAKALEA WLKKADFVDV RCVDIDVTSL AEQRSTEWMP NESLVDYLDP
NDVSLTVEGY PAPKRATFIA VKNQPNKDLV
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