| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2081 |
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| Symbol | |
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| ID | 4923617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2407722 |
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| End bp | 2408453 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163663 |
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| Product | putative methyltransferase |
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| Protein accession | YP_001094206 |
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| Protein GI | 127513009 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.505974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTCAA CTCAAGATAC TATTTACGCG CAGGCCTGTG AACATATCAG TGACTTTCAA
TTCGACGATA GAGTCGCAGG CGTCTTTAGC GATATGATCC GCCGTTCTGT TCCCGGCTAT
GGACAGATCA TCAACACCTT AGGCGATTTC GCCGACAAAT GTGTCACACC TAATAGCAAG
ATATATGATT TGGGCTGCTC TTTGGGTGCG GCCACCCTTA GCGTACGTCG CCGCATCGAA
GGTCGCGGAT GTGAGATCAT CGCCGTCGAC AACAGCGAAT CTATGATCGA GCGCTGTAAA
CAGAACCTCA GCGCCTATGT CAGCGAAACC CCGGTCGACC TTATCTGCGC CGATATACGC
GATATCGAGA TCCAAGATGC CTCCATGGTG ATCTTAAACT TCACCATGCA GTTTTTGGCC
CCGGAAGACA GACAGACGCT GATCGCCAAG ATCTATCAGG GACTCAAACC CGGCGGCATT
CTGGTGCTGT CAGAGAAATT AGTGTTCGAA GACGAGCCGG TGCAGCATCT TCTGGACGAG
CTACACCTCG ACTTTAAGCG CGCCAACGGC TATAGCGAGC TTGAGATCAG CCAAAAGCGC
AGCTCGCTCG AGCATGTAAT GAAGCCAGAC ACCCTGCCCC AGCATCAGCA AAGGCTTAAA
GCCCAGGGCT TTAGCCATTT CAGCGTCTGG TTCCAATGTT TTAATTTCGC ATCTATGGTG
GCCATCAAGT GA
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| Protein sequence | MNSTQDTIYA QACEHISDFQ FDDRVAGVFS DMIRRSVPGY GQIINTLGDF ADKCVTPNSK
IYDLGCSLGA ATLSVRRRIE GRGCEIIAVD NSESMIERCK QNLSAYVSET PVDLICADIR
DIEIQDASMV ILNFTMQFLA PEDRQTLIAK IYQGLKPGGI LVLSEKLVFE DEPVQHLLDE
LHLDFKRANG YSELEISQKR SSLEHVMKPD TLPQHQQRLK AQGFSHFSVW FQCFNFASMV
AIK
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