| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2074 |
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| Symbol | |
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| ID | 4923438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2395994 |
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| End bp | 2398504 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163656 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001094199 |
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| Protein GI | 127513002 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA CAAGCAGATT AGCTGCGGCA GTTAAATTAA GTTTAATTGC GACAGTGTCG
ACCAGCGGAT ATTTTGTTGC CAACAATGCC GTTGCTGCCG AAGAAAGTGC CTCTTTTGAA
CGTATCGCGG TAACGGGTTC ACGCATTCAA CGTCAAGACA TGGAAACGGC TTCACCTGTT
ACCGTAATCG ACGCCAGTGC CATTCGCGCC GAGGGTTACA ACTCGGTTGA TGAGATCCTG
CAGGCGCAAC CTGCCATGGC GGGTATGGCA GTAGGCTCCA CCACTAACAA TGGTGCCGAC
GGTGTCGCCC AGGTGGATCT ACGAGGTATG GGCGCAAGCC GTACGCTAGT GCTGTTAAAT
GGCCGCCGCA TGGTGAACTC AGGTTCGGGC GCCGACAGTG CAGTGGATCT GAACACTATC
CCAGTGGCGA TGATCGCCCG TGTGGAGATC CTGAAAGACG GTGCCTCAGC GGTTTATGGT
TCTGACGCCA TTGCCGGTGT GGTGAACATC ATCACCAAGA AAGATTTTGA AGGCTTCCAG
CTGGACATAA ATGGCGGCGC GACCGACAAG GGCGACGGCG AAAACGTTGA GATCAGTGCG
CTTTACGGAT TCAATACCGA CGGTGGTAAC TATACCTTTG GTGTGGCTTA TTCAGACCGT
GGTGGCGTGA TGCAAAAAGA TCGCGACTGG GTCGAGAAGG GCGCCAGTAG CTTCATCCCA
ACCGGCTCAT TAGGCGGCAA GGTACAAGAC GAGAACGGCA ACTGGGTCGA TCGCACCGAA
GGTTATGACT TTACCCAGGA CAGCTGGCTA CAGACGCCTA ACGAGCGTTA CAGCTTCTTC
GCCAACGCGA CCCAGGAGTT TGCGAACGAA ATCGTCTTTA CCGGCGACCT GCTTTACACC
AAACGTCAAT CTGAGCAGAT GATGGCGGCT CAGCCAGCCT CTGTGATGTT AGATGTGTGC
ACGCCAACTT CTACTGGTAA CTGCATCACG CTAACTGACG AGATGGTTGC CGGTGGCATC
ACGCCTGACG ACCAAGGTCG CGTCGAATAT CGCAGAAGAA CCACAGATGC GGGTAACCGT
ATCTATGAGC AAGACACTGA CACTCTGCGC GTCTCAGCGG GTCTGGCCGG TGAATTCGAT
GTTCACACTG GCATCGCCTG GGATCTTTCT TACACCTATG GTAAGAACAA GGCAGAGACC
TGGGTGCATA ACTCAATCAA CGCTAAGAAC ATGGCGCAGT CTGTCTATGA CAACCAGGAT
GCCTGGTTCA GCGGTGACCC ACTGTCTCAA GCTATCGTCG ACGACATCAG CTACCTGGAA
AGCACTACCG GCGGTAACGA GCAGCACATA GTATCAGGCG TGATCAGCGG CGAAGCCTTT
GACCTGGAAG CGGGCCCAGT GGCCTATGCG ATTGGCGCCG AGTATCGCCA TGACAGCGGT
TACTACAATC CAGATCCAGT GATCGTTGCC GGTGAAGGCA CAGCAGCCCA GCAAGATCCT
ACCGATGGTA GCTACAGCGT GGTGTCTGTC TATCAAGAGG TGAGTGTACC TTTCACCGAC
AAGCTGACCG GTGAATTTGC GCTGCGTTTC GATGACTACT CAACTTTTGG TAACGCATCG
ACCTGGAAGA TAGGTTTGAC CTATGAGGCA ACCGATGACC TTATGCTTCG CGCCGTAGCG
GCAACCGGTT TCCGCGCGCC AAACGTGAGC GAGCTGTTCG GTGGTAACGT GGGGTCATAC
GACTACCTAG ACGATCCTTG GGGCAACGAG CAAGACCCAC AGATCTTGGT GAACTACACC
TCAGATCCCG ATCTGAAGGC TGAGTCTTCA GAGTCTTACA CAGCTGGTCT GGTGTACTCG
CCAAGCTATA TCGACGGCAT GTCACTGACG CTGGACTACT GGCGCTTCAA GATCAAAGAC
GCCATCTCGC GTCTGGACGT TCAAGCGGGT CTGAATGCTT GTCACGCTGG TGATACTACA
GCTTGTGAAA CCTTTGGTAT TACCCCTGAC GGTAACCTGG AGAACCTGAC TAACCCGCTA
ACCAACGTGG GTTATCAAGA CACAAGTGGT ATCGACTTTA ACCTAGCTTA CCGTTTCGAA
GGCCTGGGTC TGGATTGGAG CATCAGCAAC GATCTGACCT ACCTGCTCGA GTTTGAACAG
GATGGCATCG ACTACACCGG CACCATCGGC GGCATGTTCG GTGGTTACGC TAAGGTGAAG
AACAACTTCA GCGTGAAGGC CGGCCAGGGT GACTGGAGTC TGATGTACTC TAACCGCTTT
ATCGGTGAGA TGGATGACAT CAACTATGGT GACACAGTTG ATTCAGTGCT GTACCACAAC
ATCTCGGGTA TGTACCACAT CAACGACAGC ATTACGGCAA GTCTAGGCGT GAAGAACTTC
ACCGACGAGA AGCCAGTGAT GGTGGCAAGT GGTAACGAAG CAGGCACAGT GCCTGAGGTT
TACGACACTA TCGGTCGTCA GATCTACGGC GGTGTAACCG TTAAGTTCTA A
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| Protein sequence | MIKTSRLAAA VKLSLIATVS TSGYFVANNA VAAEESASFE RIAVTGSRIQ RQDMETASPV
TVIDASAIRA EGYNSVDEIL QAQPAMAGMA VGSTTNNGAD GVAQVDLRGM GASRTLVLLN
GRRMVNSGSG ADSAVDLNTI PVAMIARVEI LKDGASAVYG SDAIAGVVNI ITKKDFEGFQ
LDINGGATDK GDGENVEISA LYGFNTDGGN YTFGVAYSDR GGVMQKDRDW VEKGASSFIP
TGSLGGKVQD ENGNWVDRTE GYDFTQDSWL QTPNERYSFF ANATQEFANE IVFTGDLLYT
KRQSEQMMAA QPASVMLDVC TPTSTGNCIT LTDEMVAGGI TPDDQGRVEY RRRTTDAGNR
IYEQDTDTLR VSAGLAGEFD VHTGIAWDLS YTYGKNKAET WVHNSINAKN MAQSVYDNQD
AWFSGDPLSQ AIVDDISYLE STTGGNEQHI VSGVISGEAF DLEAGPVAYA IGAEYRHDSG
YYNPDPVIVA GEGTAAQQDP TDGSYSVVSV YQEVSVPFTD KLTGEFALRF DDYSTFGNAS
TWKIGLTYEA TDDLMLRAVA ATGFRAPNVS ELFGGNVGSY DYLDDPWGNE QDPQILVNYT
SDPDLKAESS ESYTAGLVYS PSYIDGMSLT LDYWRFKIKD AISRLDVQAG LNACHAGDTT
ACETFGITPD GNLENLTNPL TNVGYQDTSG IDFNLAYRFE GLGLDWSISN DLTYLLEFEQ
DGIDYTGTIG GMFGGYAKVK NNFSVKAGQG DWSLMYSNRF IGEMDDINYG DTVDSVLYHN
ISGMYHINDS ITASLGVKNF TDEKPVMVAS GNEAGTVPEV YDTIGRQIYG GVTVKF
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