Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2066 |
Symbol | |
ID | 4923430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2388127 |
End bp | 2388705 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163648 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_001094191 |
Protein GI | 127512994 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0151364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT ATCTCCTCCT ATTGGTCGGC ACAGTGCTGG TCAACAACTT TGTATTAGTT AAATTTCTCG GCCTCTGCCC CTTCATGGGG GTCTCGAGTA AGTTGGAATC GGCTATCGGC ATGTCGATGG CGACCACCTT CGTGCTCACC CTTGCCTCTA TCTTAAGCTA CCTGGTCGAC ACCTATCTGT TGACCCCTTT CGATCTTAGC TATCTGCGCA CCATGGCCTT TATCTTGGTT ATCGCCGTCG TGGTGCAATT TACCGAGATG CTGGTGCAGA AGACCAGTGC CGCCCTGCAC AGGGCTCTGG GTATCTATCT GCCGCTGATC ACCACCAACT GCGCCGTATT GGGTGTAGCC CTGCTCAACG TCAACGAGAA ACACGACTTT ATCGAGTCGG CCATTTATGG TTTTGGCGCG GCGGTCGGTT TCTCCATCGT CTTGATCCTC TTCTCTGCCA TGCGTGAGCG CCTCGCCGCC GCCGATGTTC CGGCGCCTTT CAAGGGCGGC GCCATCGCCA TGATCACCGC AGGCCTGATG TCTCTGGCCT TCATGGGCTT CACAGGTTTG GTTAATTAA
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Protein sequence | MSEYLLLLVG TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVD TYLLTPFDLS YLRTMAFILV IAVVVQFTEM LVQKTSAALH RALGIYLPLI TTNCAVLGVA LLNVNEKHDF IESAIYGFGA AVGFSIVLIL FSAMRERLAA ADVPAPFKGG AIAMITAGLM SLAFMGFTGL VN
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