| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2062 |
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| Symbol | |
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| ID | 4923426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2381452 |
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| End bp | 2382135 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163640 |
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| Product | exsB protein |
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| Protein accession | YP_001094187 |
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| Protein GI | 127512990 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
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| TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAAG CTGTTGTTGT GTTTAGTGGC GGACAAGACT CCACCACCTG TTTAATTCAA
GCCCTGAATC AATATGATGA AGTGCATGCG GTTACCTTCG ATTATGGCCA GCGCCACAGC
GAAGAGATTG CCACCGCCGC CAAGCTGGCC AAGGACCTCA AAGTCGACAG CCACAAGATA
TTAGATGTAA CCGTGCTGAA CGAGCTGGCT ATCTCTGCCC TGACCCGTGA TGCCATTCCC
GTATCCAACG AGCTGATGGA TAACGGCCTG CCCAACACCT TCGTGCCTGG GCGTAACATA
CTGTTTCTCA CCTTGGCCGG GATCTACGCC TATCAGCTGG GCGCCGAAAG TGTGATCACC
GGCGTGTGTG AAACCGACTT CTCCGGCTAT CCAGATTGTC GCGATTCATT TATCAAGGCG
ATGCAATCGG CGCTCGAGCA GGGAATGGAT CGTGAACTTA AGCTCGTCAC TCCCTTAATG
TGGCTTAACA AGGCCCAGAC CTGGGCACTG GCAGACAAGT ACCACAGCCT GGAGCTGGTT
AGAGACCAGA CCCTCACCTG CTATAACGGT ATCGTCGGCA GCGGCTGCGG CACCTGCCCC
GCCTGCCTGC TGAGAGCCAA GGGACTGAAT GACTATCTGG ATGACAAAGC AGGTGTCATG
GCCGAACTGG ACGCAAAATG TTAG
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| Protein sequence | MSKAVVVFSG GQDSTTCLIQ ALNQYDEVHA VTFDYGQRHS EEIATAAKLA KDLKVDSHKI
LDVTVLNELA ISALTRDAIP VSNELMDNGL PNTFVPGRNI LFLTLAGIYA YQLGAESVIT
GVCETDFSGY PDCRDSFIKA MQSALEQGMD RELKLVTPLM WLNKAQTWAL ADKYHSLELV
RDQTLTCYNG IVGSGCGTCP ACLLRAKGLN DYLDDKAGVM AELDAKC
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