| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2060 |
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| Symbol | |
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| ID | 4921691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2379396 |
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| End bp | 2380457 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163638 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_001094185 |
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| Protein GI | 127512988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.70265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAT CTTGGGTCAA CCAGGCCATC GCAAAGATCG AGGCTGATTA TCAACGCAGT
GCAGACACTC ATCTGATCAA GCTGGAACTG CCCATGCTGC CCTGCATCGA TATCTACCTA
AAAGATGAAA GCACCCATCC CACAGGCAGC CTCAAGCATC GCCTGGCGCG CTCTCTGTTT
CTCTACGCCC TGTGTAACGG CTGGATCACC CAAGATACGC CCATTATCGA ATCCTCCTCC
GGTAGCACCG CAGTGTCCGA GGCCTACTTC GCACGCCTGC TGGGGCTGCC CTTCATCGCC
GTGATGCCCG CCTCGACCGC CAAGAAGAAG ATCCAACAGA TCGAGTTTTA TGGTGGACGC
TGCCATTTCG TCGAGCATTC GAGTCAGATC TACGCCGAGT CACAACGCCT GGCCGAAGAG
CTATCGGGCC ACTATATGGA TCAGTTTACC TACGCAGAGC GAGCCACCGA CTGGCGCGGT
AACAACAATA TCGCCAACTC TATCTTCGAG CAGATGCAAA GAGAGCCGCA TCCCGTCCCC
AGCTGGATCG TGATGAGCCC AGGCACGGGC GGCACCTCGG CCACCATAGG CCGCTATATT
CGTTACCAGT GTGCCAAGAC CAAGCTTTGT GTGGTGGACC CAGAAAATTC GGTGTTCTAC
GACTATTACC ATAGTGGCGA TGCCAGTATC AGCTGCGCCG GCGCCAGCCG TATCGAAGGC
ATAGGCCGTC CGCGGGCAGA GCCCTCTTTT ATCCCAGGGG TTGTCGACCA TATGGTCAAG
ATTGATGACA GCGCATCGAT CGCCACCATC TATTGGTTAG AGACGCTGAT CGGCCGCAAG
GCAGGCCCTT CGACCGGCAC CAACCTCTAT GGCGCCCTGC AACTGGCGAG CGAAATGCAT
GCCAACGGCC AAACCGGCTC TATCGTTACC CTGCTATGCG ACTCGGGAGA TCGTTATCTC
GATACCTACT ACGACAAGCA ATGGGTAGAT GAGCATATCG GCGACATTAC TGAGTATCAG
GCCAAGCTAG CGGCCTTTAA TGAGTCGGGT CATTTGGAAT AG
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| Protein sequence | MDQSWVNQAI AKIEADYQRS ADTHLIKLEL PMLPCIDIYL KDESTHPTGS LKHRLARSLF
LYALCNGWIT QDTPIIESSS GSTAVSEAYF ARLLGLPFIA VMPASTAKKK IQQIEFYGGR
CHFVEHSSQI YAESQRLAEE LSGHYMDQFT YAERATDWRG NNNIANSIFE QMQREPHPVP
SWIVMSPGTG GTSATIGRYI RYQCAKTKLC VVDPENSVFY DYYHSGDASI SCAGASRIEG
IGRPRAEPSF IPGVVDHMVK IDDSASIATI YWLETLIGRK AGPSTGTNLY GALQLASEMH
ANGQTGSIVT LLCDSGDRYL DTYYDKQWVD EHIGDITEYQ AKLAAFNESG HLE
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