Gene Shew_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2056 
Symbol 
ID4923740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2374851 
End bp2375330 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content52% 
IMG OID640163631 
ProductSecC motif-containing protein 
Protein accessionYP_001094181 
Protein GI127512984 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACC CCTCCCTCCC ATGCCCCTGT GGCAGGTCGG TGAAAGATAA ACCCCTAAGC 
TACAACCAGT GTTGTGAACC TTTTCATCTC GGGGTCATTG CGCCGGATCC CGAATCCTTG
ATGCGCAGCC GTTATTCGGC TTTCGTGCTC AAGTTGCACA AGTATCTGAT TGCGACCCAT
CATCCCGATT ATCTGGACGG ACTGAGTGTC GAGATGCTCG ATGAAGAGAA TCATACGAGT
TGGCTGGGGC TAAGCGTTAA TCGAAGCAGC AGCGCTCAAG ATGCGGGAAT GGTAGAGTTT
CACGCCTGGT ACCAAGGTAG CAACGGACTG AACGCCATTC ATGAAATCTC AGACTTTGTG
AAGCAAGATG GTCGCTGGTG GTACACCCAG GGCGAGCAAC TTGTGCCCAA ATACCCCAAA
CGCAACGCTC CCTGTGTCTG CCAGAGCGGC AAGAAATTTA AGCAGTGCTG TCTTAAATAG
 
Protein sequence
MINPSLPCPC GRSVKDKPLS YNQCCEPFHL GVIAPDPESL MRSRYSAFVL KLHKYLIATH 
HPDYLDGLSV EMLDEENHTS WLGLSVNRSS SAQDAGMVEF HAWYQGSNGL NAIHEISDFV
KQDGRWWYTQ GEQLVPKYPK RNAPCVCQSG KKFKQCCLK