| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2053 |
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| Symbol | |
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| ID | 4923737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2371154 |
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| End bp | 2373058 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163628 |
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| Product | peptidyl-dipeptidase A |
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| Protein accession | YP_001094178 |
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| Protein GI | 127512981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.10811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.434811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA TTTGTGCCAA GTTGACTCCG GTTGCCGTGG TCATCGCACT CTCTCTAGGG
ATCGGCGGCT GTAATGACGA TAACAATGCT AATACAGAAA GCAAGGCCAC TGCAGAAAGC
AAAGCCCAGC AGGCAGCAGG GCAAGATGGT CTAAAACAGC AAACCTCTGA GCAAGATAAG
CTGGCCGAAG CCAAACAGTT TATCAGCAAT GCCGAGAGCC AACTCGCCGA TCTGTCTATT
GAACAAAATC GCGCCGAGTG GATCTACAGC AACTTCATCA CTGAAGACAC GGCCACCCTC
GCCGCCTCTG TCGGCGAACG CCAAACCGCC CTATCGGTAC AACTCGCCAC CCAAGCCGCC
AACTATAGCC AGCTGCCACT GGATGAGGTC AACACACGTA AACTCAACAT CTTACGTAGC
GCATTGGTGC TGCCGGCCCC TCTGGATCCT AAGAAGAATG CCGAACTTGC CAATATCAGC
GCCGAGCTAA ATGGCCTCTA TGGTAAAGGC AAATACTGTC TGGCCGATGG ACGCTGTCTC
ACTCAGCCAG AGCTTTCGGG CATCATGGCC AGCTCACGCG ATCCTAAAGA GCTTGAGGAG
ATCTGGAAAG GCTGGCGTGA GATCGCCAAG CCGATGCGTC CCCTGTTTGA GCGCGAGGTG
GAGTTAGCCA ACGAAGGAGC TAAAGATCTG GGTTATGCCA ACCTCTCTGA ACTCTGGCGT
AGCCAGTACG ACATGCAGCC CGATGCCTTC TCTGCAGAGC TCGACAGACT CTGGGGCCAA
GTAGAGCCTC TGTATGAATC GCTGCACTGT TATGTCAGGG GCGAGCTGAA CGAAAAATAT
GGTGATGAAG TCGCACCTAA CAAAGGCCCT ATTCCAGCAC ATCTGCTTGG CAACATGTGG
GCGCAGCAAT GGGGTAACGT CTATGACATG GTGGCGCCAC AAGATGCGGA CCCTGGCTAT
GATGTGACCG AGCTGCTGGC GAAACAGGGC TATGATGAGC ATCAGATGGT TAAACAGGCC
GAGGGCTTCT TCACCTCGCT CGGTTTCGAC GCACTGCCTG AGACCTTCTG GAGCCGTTCG
CTCTTCCTGC AGCCCAAGGA TCGCGATGTG GTCTGTCACG CCTCGGCCTG GGATCTCAAT
AACCTAGATG ATATTCGTAT CAAGATGTGT ATCCAGAAGA CGGCAGAAGA TTTCACCGTT
ATTCACCATG AACTGGGCCA CAACTTCTAT CAACGCGCCT ATAAAGAGCA GCCCTTCATC
TTTAAGAACA GTGCCAACGA TGGCTTCCAT GAGGCGATTG GTGACACGGT CGCCCTGTCT
ATCACGCCTA ACTACCTGAA GCAGATAGGC CTACTGCAAG AGGTGCCAGA TGCCTCCAAA
GATATCGGTC TCTTGCTAAG ACAGGCACTT GATAAGGTGG CCTTCCTGCC CTTTGGCCTC
ATGATAGATC AATGGCGCTG GAAGGTATTC AGCGGCGAGA TCACTCCAGC ACAATACAAC
CAAGCCTGGT GGGAGCTGCG TGAGAAGTAT CAGGGCGTTA AGGCGCCAAT CGCCCGCAGC
GAAGCCGACT TCGACCCGGG TGCCAAGTAC CATGTACCCG GCAACGTGCC CTACACCCGC
TACTTCCTGG CGCATATTCT CCAGTTCCAG TTCCATAAGG CGCTGTGTGA TATCGCCGGC
GATAAGGGCC CGGTTCACCG TTGCAGCATC TACGGTAACA AGGATGCGGG CGCTAAGCTA
AACGCCATGT TAGAGATGGG TCAGAGTAAG CCTTGGCCAG AAGCCCTTGA AGTGGTCACT
GGCTCGCAAA ACATGGATGC CTCTGCGGTA CTCGATTACT TTGCGCCGCT AAAAGTCTGG
CTGGATAAGC AGAACAAGCA GGCTAACCGT CAGTGTGGCT GGTAA
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| Protein sequence | MKPICAKLTP VAVVIALSLG IGGCNDDNNA NTESKATAES KAQQAAGQDG LKQQTSEQDK
LAEAKQFISN AESQLADLSI EQNRAEWIYS NFITEDTATL AASVGERQTA LSVQLATQAA
NYSQLPLDEV NTRKLNILRS ALVLPAPLDP KKNAELANIS AELNGLYGKG KYCLADGRCL
TQPELSGIMA SSRDPKELEE IWKGWREIAK PMRPLFEREV ELANEGAKDL GYANLSELWR
SQYDMQPDAF SAELDRLWGQ VEPLYESLHC YVRGELNEKY GDEVAPNKGP IPAHLLGNMW
AQQWGNVYDM VAPQDADPGY DVTELLAKQG YDEHQMVKQA EGFFTSLGFD ALPETFWSRS
LFLQPKDRDV VCHASAWDLN NLDDIRIKMC IQKTAEDFTV IHHELGHNFY QRAYKEQPFI
FKNSANDGFH EAIGDTVALS ITPNYLKQIG LLQEVPDASK DIGLLLRQAL DKVAFLPFGL
MIDQWRWKVF SGEITPAQYN QAWWELREKY QGVKAPIARS EADFDPGAKY HVPGNVPYTR
YFLAHILQFQ FHKALCDIAG DKGPVHRCSI YGNKDAGAKL NAMLEMGQSK PWPEALEVVT
GSQNMDASAV LDYFAPLKVW LDKQNKQANR QCGW
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