| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2050 |
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| Symbol | |
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| ID | 4923734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2366431 |
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| End bp | 2367870 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163625 |
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| Product | pyruvate kinase |
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| Protein accession | YP_001094175 |
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| Protein GI | 127512978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0469] Pyruvate kinase |
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| TIGRFAM ID | [TIGR01064] pyruvate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000311706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.406012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCA GAACCAAAAT TGTAACGACT CTGGGTCCAG CAACCGATCG TGACGACAAT
CTACGTCGTA TCATCAAAGC TGGTGCAAAC GTTGTTCGCC TCAACTTCTC TCATGGTTCA
CCTGAAGATC ACCTGAAACG TGCCACCGAC GTGCGAAATA TCGCCAAAGA GCTCGGTGTT
CACGTTGCCG TACTGGGTGA TCTACAAGGC CCTAAGATCC GTGTATCAAC CTTCAAAGAC
AACAAGAAGG TGCAACTGGA TATCGGTCAG GCATTTATCT TAGATGCCGA TCTCGAAAAA
GGCCAAGGTG ATGAACACCA AGTGGGTATC GACTATAAAG AGCTACCGCA AGATGTCACC
ATCGGCGATA TCCTGATGCT CGACGATGGT CGTGTTCAGC TTAAAGTAGA AAAAGTTGAA
GGTAATAAGG TTCACACCAC AGTGACGGTT GCCGGTCCCC TGTCTAACAA CAAGGGCATC
AACAAGAAAG GTGGTGGTTT GTCTGCCGCG GCGTTGACCG AGAAAGACAA GCAAGACATC
ATCACAGCAG CGGCCATCAA GGTCGACTAC CTAGCGGTCT CTTTCCCACG CAGCGGCGCC
GATCTGAACT ACGCCCGTGA ACTGGCCCAG AAGGCTGGTA GCAATGCCCT GATCGTCTCT
AAAGTTGAGC GCGCCGAAGC CGTTGCCTCT GATGAAGCGA TGGACGATGT GATCCTAGCC
TCTGACGCCG TGATGGTTGC CCGTGGTGAC CTTGGTGTTG AAATTGGTGA CGCTGCTCTG
GTGGCTGTAC AGAAGAAACT GATCAGCCGT TCTCGCCAGC TGAACAAGAG CGTGATCACC
GCGACTCAGA TGATGGAGTC TATGATCACC AGCCCAATGC CAACCCGCGC CGAAGTAATG
GACGTGGCTA ACGCCGTGCT TGATGGCACT GACGCCGTGA TGCTTTCGGC CGAAACCGCT
GCCGGTGACT TCCCTGAAGA AACCGTTAAG GCGATGGCCA ACGTTTGTCT TGGCGCCGAG
GCTCACCCAA GTGTTCAGGT GTCTAAGCAC CGTATGGACG AGCGTTTCAC CTCGGTTGAA
GAAACCATCG CCCTGTCGAC CATGTATGCG GCCAACCACC TGGAAGGCGT TAAGGCTATC
GTTGCCCTGA CAGAATCTGG TGCGACACCT CAGCTTATGT CTCGTATCAG CTCTGCTCTG
CCTATCCTGG CCCTATCACG TCACGATGTG ACTCTAGCTA AGATGGCACT GTACCGCGGC
GTACAGCCTG TCTACTTCGA CTCAACAGCC TACGGCGCAG ACGAGCTAGC GAAGAAGGCA
CTTGAAGCCC TGACCGAAGC GGGTTACCTC ACATCCGGTG ACATGGTACT GATGACCAAG
GGTGACGCGA TGGAAACTAT CGGTGGCACT AACACCTGTA AGGTACTGAT CGTCGCCTAA
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| Protein sequence | MFRRTKIVTT LGPATDRDDN LRRIIKAGAN VVRLNFSHGS PEDHLKRATD VRNIAKELGV
HVAVLGDLQG PKIRVSTFKD NKKVQLDIGQ AFILDADLEK GQGDEHQVGI DYKELPQDVT
IGDILMLDDG RVQLKVEKVE GNKVHTTVTV AGPLSNNKGI NKKGGGLSAA ALTEKDKQDI
ITAAAIKVDY LAVSFPRSGA DLNYARELAQ KAGSNALIVS KVERAEAVAS DEAMDDVILA
SDAVMVARGD LGVEIGDAAL VAVQKKLISR SRQLNKSVIT ATQMMESMIT SPMPTRAEVM
DVANAVLDGT DAVMLSAETA AGDFPEETVK AMANVCLGAE AHPSVQVSKH RMDERFTSVE
ETIALSTMYA ANHLEGVKAI VALTESGATP QLMSRISSAL PILALSRHDV TLAKMALYRG
VQPVYFDSTA YGADELAKKA LEALTEAGYL TSGDMVLMTK GDAMETIGGT NTCKVLIVA
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