| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2047 |
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| Symbol | |
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| ID | 4923731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2362901 |
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| End bp | 2363599 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163622 |
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| Product | 6-phosphogluconolactonase |
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| Protein accession | YP_001094172 |
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| Protein GI | 127512975 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
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| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0479174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.229711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAG AATCCGTATT CAAATCTTTT GATAGCAAAA CCAGCCTGGA GGCGCAGCTT
GCCGATCGCA TCGCCGAGCA GCTTCAGGCG GCTATCGACG CCCGCGGTAA GGCTAGCCTG
GTAGTGTCTG GCGGCTCGAC ACCGCTGGCA CTGTTTAAGC TGCTGAGTCA GAAGGCGATT
GAGTGGAACG ATGTCTATAT CACCCTGGCC GATGAGCGCT GGGTCGATAG CGAGCACAGC
GATTCCAACG AGCGCTTGGT GAGACAGCAC CTGCTGCAAA ACCGCGCCGC GGGCGCCAAG
TTTCGCGGCC TGAAGAATAT GTTTGCCACG CCAGAGGCTG GTGTCGACAT GGCCATAGAG
CAACTAGCCA ACTTCCCGAG GCCCTTCGAT GTGGTGGTAC TTGGCATGGG CAATGACGGC
CATACCTGCT CCTGGTTCCC GTGCGCTAAG GAGATTGAAC AGGCGCTGAC TACTCAGGCG
CTGTGTCTGG CGGTGAATCC GGGCGAGGCG CCCCATGGTC GCATGACCAT CTCTAAGCAG
GGGATTTTAG CGTCACGCCA AATCTATTTA CACATAGTCG GTGAACAGAA GCTCGCCGTT
TACCGACAAG CGCTTGAGAA TGACGATGCC AAGGCGATGC CGATACGTGC GGTACTTGCC
CAGCATAAGA CACCCGTCGA TGTTTATTGG AGCGCTTAA
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| Protein sequence | MIKESVFKSF DSKTSLEAQL ADRIAEQLQA AIDARGKASL VVSGGSTPLA LFKLLSQKAI
EWNDVYITLA DERWVDSEHS DSNERLVRQH LLQNRAAGAK FRGLKNMFAT PEAGVDMAIE
QLANFPRPFD VVVLGMGNDG HTCSWFPCAK EIEQALTTQA LCLAVNPGEA PHGRMTISKQ
GILASRQIYL HIVGEQKLAV YRQALENDDA KAMPIRAVLA QHKTPVDVYW SA
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