| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2043 |
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| Symbol | |
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| ID | 4923772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2358253 |
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| End bp | 2359341 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163618 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001094168 |
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| Protein GI | 127512971 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.242597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACG TTAAGGATCA TCTAGCCCCC TGGCAGCACA GTCATCAGTT CGCCAATTTA
AACAGTGATG GCGAGCGCAA CACCCGTTAT GTGTTGCTGC TAACCCTATT TACCATGATC
GCCGAGATTG TTGCTGGTAC CGTATACGGT TCGATGGCCT TATTGGCCGA CGGTTGGCAT
ATGGGGACCC ATGCCGCGGC GTTTCTCATT ACCCTGTTTG CCTATCACTA TGCGAAGAAA
CATGCCAACA GCCCTGATTT TGCCTTTGGT ACAGGTAAGG TAAGCGTCTT AGGGGGCTTT
ACAAGTGCCG TCGCGCTCGG ACTGGTAGCG CTGCTTATGG TGGTTGAGTC GGTGAGCCGC
CTGTTTAACC CAGAGCAGAT CCACTTTAAC GAAGCGATCT TTGTGGCGGT GATCGGCCTG
ACGGTCAATG TAATTTCTGT CTTTTTGCTA AAAGACCACC ATGGACATCA CCACCACCAC
GGGCATCATC ATAATCACCA TCATGATCAC AGTCATGACC ACAGTCACGG GCATCATCAC
GATCACAGCC ATGAGCACGA TCATAGCCAC GAGCATGACG CTCATCACCA TGTTCATGAG
CATAAACATG AAAAAGCGCA TGCACACGGT GACAAGGGTC ATCATGATCA CAACCTGCGC
GCTGCGTATT TCCATGTAAT GGCCGACGCC TTGACCTCTC TGCTCGCCAT TGGCGCCTTA
CTGTTCGGTA AGTATCTGGG ACTGACCTGG TTAGATCCCG TAATGGGCGT GGTTGGCGCT
GTGATCATCA CCAGCTGGGC GTGGGGCTTG ATGAAGCAAA CTGGGCCGAT TCTGCTCGAT
GCCAGCATAG AGAAACAATA CGTTAATCAG ATGGTTGAGT TGATTGAGGC CGAGCAGGAT
CATCAGGTGA GCGATATTCA CGTCTGGCGT GTTAGCGCCG ATCATTATGC CGCCATGGTC
TCTATCGTCA GCCATGCGCC GAAGGAGCTG GACTATTTCA AGCAGAAGTT GGCTAAATTT
GAACGTATTG ACCATCTGAC GGTCGAACTC ATCACTTGCC GTCAAACCGC TTGCCAAGTG
GCAGAATAA
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| Protein sequence | MSNVKDHLAP WQHSHQFANL NSDGERNTRY VLLLTLFTMI AEIVAGTVYG SMALLADGWH
MGTHAAAFLI TLFAYHYAKK HANSPDFAFG TGKVSVLGGF TSAVALGLVA LLMVVESVSR
LFNPEQIHFN EAIFVAVIGL TVNVISVFLL KDHHGHHHHH GHHHNHHHDH SHDHSHGHHH
DHSHEHDHSH EHDAHHHVHE HKHEKAHAHG DKGHHDHNLR AAYFHVMADA LTSLLAIGAL
LFGKYLGLTW LDPVMGVVGA VIITSWAWGL MKQTGPILLD ASIEKQYVNQ MVELIEAEQD
HQVSDIHVWR VSADHYAAMV SIVSHAPKEL DYFKQKLAKF ERIDHLTVEL ITCRQTACQV
AE
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