| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2036 |
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| Symbol | |
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| ID | 4923765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2348339 |
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| End bp | 2348950 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640163609 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001094161 |
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| Protein GI | 127512964 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0357361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00120392 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTACAG GTATTGTTCA AGCCACATGT GAAGTGGTGG CTATTCATAA AAAAGATGGT
CTTAATACAA TCGAAATTGC GATGCCGTCA CACCTGAAGG AAAACTTGCA GCGAGGTGCA
AGTGTCGCCA ATAACGGCGT CTGTCTGACC GTTACCGAGA TGGCAGATGA TAGGGTGTTT
TTCGATGTAA TGGAAGAGAC ATTGAGGCTT ACCAATTTGG CCGGTCTGTC TGTGGGTAGC
CAGGTTAATA TCGAGCGCTC ATTGACCTAT GGCAGCGAGA TAGGTGGCCA TGTGTTATCG
GGTCATGTCC ACACTCAGGC CACCGTGGTT GAGGTGAGTC ATACGCCTGC TCATTTTGAT
ATTCGTCTCG AAGTTGACCC TAAATGGATG AACTACATTC TCTACAAAGG TTTCGTTGGT
GTGAATGGTT GTAGCCTGAC CGTAGGGGAA GTGAGTGAAT CTGGCTTTAT GCTGCATTTG
ATCCCGGAAA CTTTGGAGAT CACCAACTTA GACGAGGTCG CTGTCGGCAC CATGCTTAAT
ATCGAGATAG ACAGTCAGAC TCAGGCTATC GTGGACACGG TTGAGCGGGT ATTGGCCAAG
CGTTTGGGTT AG
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| Protein sequence | MFTGIVQATC EVVAIHKKDG LNTIEIAMPS HLKENLQRGA SVANNGVCLT VTEMADDRVF
FDVMEETLRL TNLAGLSVGS QVNIERSLTY GSEIGGHVLS GHVHTQATVV EVSHTPAHFD
IRLEVDPKWM NYILYKGFVG VNGCSLTVGE VSESGFMLHL IPETLEITNL DEVAVGTMLN
IEIDSQTQAI VDTVERVLAK RLG
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